avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Ctcfl | mm10_v2_chr2_-_173119402_173119525 | -0.45 | 5.9e-03 | Click! |
Ctcf | mm10_v2_chr8_+_105636509_105636589 | 0.08 | 6.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_+_32286946 Show fit | 4.21 |
ENSMUST00000101387.3
|
hemoglobin, theta 1B |
|
chr19_-_45816007 Show fit | 2.76 |
ENSMUST00000079431.3
ENSMUST00000026247.6 ENSMUST00000162528.2 |
Kv channel-interacting protein 2 |
|
chr11_+_32300069 Show fit | 2.48 |
ENSMUST00000020535.1
|
hemoglobin, theta 1A |
|
chr7_-_109170308 Show fit | 2.20 |
ENSMUST00000036992.7
|
LIM domain only 1 |
|
chr2_+_122637867 Show fit | 2.14 |
ENSMUST00000110512.3
|
expressed sequence AA467197 |
|
chr17_+_26917091 Show fit | 1.94 |
ENSMUST00000078961.4
|
kinesin family member C5B |
|
chr5_-_137741601 Show fit | 1.90 |
ENSMUST00000119498.1
ENSMUST00000061789.7 |
neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1 |
|
chr2_+_122637844 Show fit | 1.90 |
ENSMUST00000047498.8
|
expressed sequence AA467197 |
|
chr5_-_5749317 Show fit | 1.83 |
ENSMUST00000015796.2
|
six transmembrane epithelial antigen of the prostate 1 |
|
chr5_+_144768536 Show fit | 1.81 |
ENSMUST00000128550.1
|
transformation/transcription domain-associated protein |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.8 | GO:0014065 | phosphatidylinositol 3-kinase signaling(GO:0014065) |
0.6 | 2.8 | GO:0045163 | clustering of voltage-gated potassium channels(GO:0045163) |
0.4 | 2.5 | GO:0016185 | synaptic vesicle budding from presynaptic endocytic zone membrane(GO:0016185) |
0.2 | 2.4 | GO:0097461 | ferric iron import into cell(GO:0097461) ferric iron import across plasma membrane(GO:0098706) |
0.8 | 2.3 | GO:0072382 | minus-end-directed vesicle transport along microtubule(GO:0072382) |
0.0 | 2.3 | GO:0009250 | glycogen biosynthetic process(GO:0005978) glucan biosynthetic process(GO:0009250) |
0.5 | 2.2 | GO:0046013 | regulation of T cell homeostatic proliferation(GO:0046013) |
0.1 | 2.1 | GO:0043968 | histone H2A acetylation(GO:0043968) |
0.2 | 1.7 | GO:0039532 | negative regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway(GO:0039532) |
0.0 | 1.5 | GO:0030833 | regulation of actin filament polymerization(GO:0030833) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.0 | GO:0005751 | mitochondrial respiratory chain complex IV(GO:0005751) |
0.0 | 3.1 | GO:0071013 | catalytic step 2 spliceosome(GO:0071013) |
0.1 | 2.8 | GO:0043196 | varicosity(GO:0043196) |
0.2 | 2.6 | GO:0000812 | Swr1 complex(GO:0000812) |
0.0 | 2.4 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) |
0.1 | 2.3 | GO:0031616 | spindle pole centrosome(GO:0031616) |
0.0 | 2.2 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.0 | 1.5 | GO:0005643 | nuclear pore(GO:0005643) |
0.2 | 1.4 | GO:0070578 | RISC-loading complex(GO:0070578) |
0.1 | 1.4 | GO:0016600 | flotillin complex(GO:0016600) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.4 | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances(GO:0042626) |
0.1 | 4.2 | GO:0015002 | cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676) |
0.0 | 3.6 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
0.0 | 3.1 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.6 | 2.8 | GO:0005250 | A-type (transient outward) potassium channel activity(GO:0005250) |
0.8 | 2.5 | GO:0004373 | glycogen (starch) synthase activity(GO:0004373) |
0.2 | 2.4 | GO:0031749 | D2 dopamine receptor binding(GO:0031749) |
0.1 | 2.3 | GO:0008569 | ATP-dependent microtubule motor activity, minus-end-directed(GO:0008569) |
0.2 | 1.8 | GO:0008823 | cupric reductase activity(GO:0008823) ferric-chelate reductase (NADPH) activity(GO:0052851) |
0.0 | 1.8 | GO:0003724 | RNA helicase activity(GO:0003724) ATP-dependent RNA helicase activity(GO:0004004) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.9 | PID IL8 CXCR1 PATHWAY | IL8- and CXCR1-mediated signaling events |
0.1 | 2.6 | PID INSULIN GLUCOSE PATHWAY | Insulin-mediated glucose transport |
0.1 | 2.6 | PID MYC PATHWAY | C-MYC pathway |
0.0 | 2.0 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 1.8 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.0 | 1.6 | PID E2F PATHWAY | E2F transcription factor network |
0.0 | 1.5 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 1.5 | ST TUMOR NECROSIS FACTOR PATHWAY | Tumor Necrosis Factor Pathway. |
0.0 | 1.4 | PID PDGFRA PATHWAY | PDGFR-alpha signaling pathway |
0.0 | 1.4 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.2 | REACTOME HYALURONAN METABOLISM | Genes involved in Hyaluronan metabolism |
0.0 | 4.0 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.0 | 3.9 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.0 | 3.6 | REACTOME GLUCOSE METABOLISM | Genes involved in Glucose metabolism |
0.0 | 3.0 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.1 | 2.5 | REACTOME GAP JUNCTION DEGRADATION | Genes involved in Gap junction degradation |
0.0 | 2.2 | REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX | Genes involved in Formation of the ternary complex, and subsequently, the 43S complex |
0.1 | 2.1 | REACTOME KINESINS | Genes involved in Kinesins |
0.0 | 1.6 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.1 | 1.5 | REACTOME EXTENSION OF TELOMERES | Genes involved in Extension of Telomeres |