avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Dlx1 | mm10_v2_chr2_+_71528657_71528683 | 0.42 | 1.1e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_84988194 Show fit | 25.05 |
ENSMUST00000028466.5
|
proteoglycan 3 |
|
chr19_-_34166037 Show fit | 23.70 |
ENSMUST00000025686.7
|
ankyrin repeat domain 22 |
|
chr11_+_87793470 Show fit | 22.49 |
ENSMUST00000020779.4
|
myeloperoxidase |
|
chr14_+_80000292 Show fit | 19.08 |
ENSMUST00000088735.3
|
olfactomedin 4 |
|
chr1_+_131638306 Show fit | 17.67 |
ENSMUST00000073350.6
|
cathepsin E |
|
chr11_+_58918004 Show fit | 17.64 |
ENSMUST00000108818.3
ENSMUST00000020792.5 |
butyrophilin-like 10 |
|
chr16_+_36277145 Show fit | 15.53 |
ENSMUST00000042097.9
|
stefin A1 |
|
chr1_+_40439767 Show fit | 15.06 |
ENSMUST00000173514.1
|
interleukin 1 receptor-like 1 |
|
chr17_+_40811089 Show fit | 14.71 |
ENSMUST00000024721.7
|
Rhesus blood group-associated A glycoprotein |
|
chr11_+_58917889 Show fit | 14.58 |
ENSMUST00000069941.6
|
butyrophilin-like 10 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.6 | 28.8 | GO:0002826 | negative regulation of T-helper 1 type immune response(GO:0002826) |
6.5 | 26.1 | GO:0045575 | basophil activation(GO:0045575) |
7.5 | 22.5 | GO:0002149 | hypochlorous acid metabolic process(GO:0002148) hypochlorous acid biosynthetic process(GO:0002149) |
1.2 | 20.2 | GO:0016540 | protein autoprocessing(GO:0016540) |
4.8 | 19.3 | GO:0035524 | proline transmembrane transport(GO:0035524) |
0.3 | 16.9 | GO:1900026 | positive regulation of substrate adhesion-dependent cell spreading(GO:1900026) |
5.2 | 15.5 | GO:0006592 | ornithine biosynthetic process(GO:0006592) |
1.5 | 14.9 | GO:0030916 | otic vesicle formation(GO:0030916) |
4.9 | 14.7 | GO:0072488 | ammonium transmembrane transport(GO:0072488) |
0.9 | 13.2 | GO:0046884 | follicle-stimulating hormone secretion(GO:0046884) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 41.6 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
0.0 | 25.2 | GO:0005615 | extracellular space(GO:0005615) |
0.1 | 25.0 | GO:0016324 | apical plasma membrane(GO:0016324) |
1.4 | 22.5 | GO:0005766 | primary lysosome(GO:0005766) azurophil granule(GO:0042582) |
0.1 | 20.0 | GO:0005923 | bicellular tight junction(GO:0005923) |
1.9 | 19.1 | GO:0042581 | specific granule(GO:0042581) |
0.1 | 11.9 | GO:0000776 | kinetochore(GO:0000776) |
0.1 | 11.2 | GO:0000794 | condensed nuclear chromosome(GO:0000794) |
0.1 | 10.9 | GO:0030027 | lamellipodium(GO:0030027) |
1.5 | 10.8 | GO:0019815 | B cell receptor complex(GO:0019815) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
9.0 | 27.1 | GO:0002113 | interleukin-33 binding(GO:0002113) |
0.4 | 24.3 | GO:0004601 | peroxidase activity(GO:0004601) |
0.6 | 20.1 | GO:0004181 | metallocarboxypeptidase activity(GO:0004181) |
1.8 | 20.0 | GO:0015193 | L-proline transmembrane transporter activity(GO:0015193) |
0.6 | 17.7 | GO:0004190 | aspartic-type endopeptidase activity(GO:0004190) |
0.0 | 16.6 | GO:0045296 | cadherin binding(GO:0045296) |
5.2 | 15.5 | GO:0019202 | glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350) delta1-pyrroline-5-carboxylate synthetase activity(GO:0017084) amino acid kinase activity(GO:0019202) |
0.1 | 15.4 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.8 | 14.7 | GO:0022842 | leak channel activity(GO:0022840) narrow pore channel activity(GO:0022842) |
1.9 | 13.4 | GO:0004556 | alpha-amylase activity(GO:0004556) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 34.7 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.1 | 29.9 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.4 | 22.5 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.1 | 20.4 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 13.4 | NABA MATRISOME ASSOCIATED | Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors |
0.1 | 9.3 | PID REG GR PATHWAY | Glucocorticoid receptor regulatory network |
0.1 | 9.2 | PID NOTCH PATHWAY | Notch signaling pathway |
0.2 | 8.2 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.2 | 7.2 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.4 | 6.9 | PID SYNDECAN 3 PATHWAY | Syndecan-3-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 31.6 | REACTOME DEPOSITION OF NEW CENPA CONTAINING NUCLEOSOMES AT THE CENTROMERE | Genes involved in Deposition of New CENPA-containing Nucleosomes at the Centromere |
0.2 | 20.0 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.2 | 19.8 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.6 | 19.5 | REACTOME AMINE COMPOUND SLC TRANSPORTERS | Genes involved in Amine compound SLC transporters |
0.8 | 18.4 | REACTOME METABOLISM OF PORPHYRINS | Genes involved in Metabolism of porphyrins |
0.4 | 18.2 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.6 | 15.5 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |
1.7 | 13.2 | REACTOME HORMONE LIGAND BINDING RECEPTORS | Genes involved in Hormone ligand-binding receptors |
0.2 | 11.2 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.6 | 10.8 | REACTOME METABOLISM OF POLYAMINES | Genes involved in Metabolism of polyamines |