avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Ebf1 | mm10_v2_chr11_+_44617310_44617336 | 0.78 | 2.5e-08 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_84980458 Show fit | 15.60 |
ENSMUST00000028467.5
|
proteoglycan 2, bone marrow |
|
chrX_-_7967817 Show fit | 10.46 |
ENSMUST00000033502.7
|
GATA binding protein 1 |
|
chr17_+_48359891 Show fit | 10.41 |
ENSMUST00000024792.6
|
triggering receptor expressed on myeloid cells-like 1 |
|
chr16_-_16863975 Show fit | 9.73 |
ENSMUST00000100136.3
|
immunoglobulin lambda-like polypeptide 1 |
|
chr11_+_117797660 Show fit | 9.41 |
ENSMUST00000106331.1
|
RIKEN cDNA 6030468B19 gene |
|
chr9_-_109849440 Show fit | 9.21 |
ENSMUST00000112022.2
|
cathelicidin antimicrobial peptide |
|
chr8_-_122460666 Show fit | 8.83 |
ENSMUST00000006762.5
|
snail homolog 3 (Drosophila) |
|
chr2_+_131186942 Show fit | 8.70 |
ENSMUST00000028804.8
ENSMUST00000079857.8 |
cell division cycle 25B |
|
chr11_-_102365111 Show fit | 8.46 |
ENSMUST00000006749.9
|
solute carrier family 4 (anion exchanger), member 1 |
|
chr19_+_7268296 Show fit | 8.35 |
ENSMUST00000066646.4
|
REST corepressor 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 23.8 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
6.3 | 19.0 | GO:0002215 | defense response to nematode(GO:0002215) |
0.9 | 15.0 | GO:0051873 | disruption by host of symbiont cells(GO:0051852) killing by host of symbiont cells(GO:0051873) |
1.4 | 14.2 | GO:0030886 | negative regulation of myeloid dendritic cell activation(GO:0030886) |
0.4 | 13.9 | GO:0048821 | erythrocyte development(GO:0048821) |
0.7 | 10.9 | GO:0030322 | stabilization of membrane potential(GO:0030322) |
1.2 | 10.7 | GO:0003011 | involuntary skeletal muscle contraction(GO:0003011) |
3.5 | 10.5 | GO:0030221 | basophil differentiation(GO:0030221) |
0.6 | 10.4 | GO:0071688 | striated muscle myosin thick filament assembly(GO:0071688) |
2.0 | 10.2 | GO:0097029 | mature conventional dendritic cell differentiation(GO:0097029) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 22.2 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.0 | 19.6 | GO:0031226 | intrinsic component of plasma membrane(GO:0031226) |
0.9 | 16.8 | GO:0005861 | troponin complex(GO:0005861) |
0.1 | 16.4 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.1 | 13.1 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
0.1 | 12.5 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.5 | 11.2 | GO:0031091 | platelet alpha granule(GO:0031091) |
0.0 | 11.2 | GO:0005667 | transcription factor complex(GO:0005667) |
0.7 | 10.3 | GO:0042581 | specific granule(GO:0042581) |
0.5 | 9.6 | GO:0014731 | spectrin-associated cytoskeleton(GO:0014731) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 25.9 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.1 | 14.6 | GO:0008236 | serine-type peptidase activity(GO:0008236) |
0.2 | 10.6 | GO:0004715 | non-membrane spanning protein tyrosine kinase activity(GO:0004715) |
0.2 | 10.1 | GO:0070888 | E-box binding(GO:0070888) |
0.3 | 9.9 | GO:0005159 | insulin-like growth factor receptor binding(GO:0005159) |
0.3 | 9.6 | GO:0043325 | phosphatidylinositol-3,4-bisphosphate binding(GO:0043325) |
0.9 | 9.4 | GO:0008093 | cytoskeletal adaptor activity(GO:0008093) |
0.6 | 8.9 | GO:0008301 | DNA binding, bending(GO:0008301) |
0.4 | 8.7 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
0.0 | 8.5 | GO:0003682 | chromatin binding(GO:0003682) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 25.7 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.1 | 17.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.3 | 15.1 | PID AURORA B PATHWAY | Aurora B signaling |
0.3 | 14.6 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.2 | 11.9 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 11.6 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.2 | 10.7 | PID INTEGRIN1 PATHWAY | Beta1 integrin cell surface interactions |
1.2 | 10.6 | SA G2 AND M PHASES | Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. |
1.1 | 8.8 | ST PAC1 RECEPTOR PATHWAY | PAC1 Receptor Pathway |
0.5 | 8.1 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 28.6 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.2 | 18.0 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.2 | 10.6 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.2 | 10.1 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.6 | 10.0 | REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION | Genes involved in Cyclin A/B1 associated events during G2/M transition |
0.2 | 9.7 | REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS | Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis |
0.1 | 9.7 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.2 | 9.5 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.1 | 9.2 | REACTOME CELL SURFACE INTERACTIONS AT THE VASCULAR WALL | Genes involved in Cell surface interactions at the vascular wall |
0.3 | 8.2 | REACTOME GENERATION OF SECOND MESSENGER MOLECULES | Genes involved in Generation of second messenger molecules |