avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Ebf3 | mm10_v2_chr7_-_137314394_137314445 | 0.27 | 1.1e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 23.4 | GO:0046852 | positive regulation of bone resorption(GO:0045780) positive regulation of bone remodeling(GO:0046852) |
7.6 | 22.7 | GO:0030221 | basophil differentiation(GO:0030221) |
2.8 | 22.3 | GO:0051572 | negative regulation of histone H3-K4 methylation(GO:0051572) |
0.8 | 22.0 | GO:0015701 | bicarbonate transport(GO:0015701) |
2.5 | 19.8 | GO:0061092 | regulation of phospholipid translocation(GO:0061091) positive regulation of phospholipid translocation(GO:0061092) |
0.2 | 15.5 | GO:0038083 | peptidyl-tyrosine autophosphorylation(GO:0038083) |
0.1 | 14.2 | GO:0018107 | peptidyl-threonine phosphorylation(GO:0018107) |
2.3 | 13.8 | GO:0014004 | microglia differentiation(GO:0014004) microglia development(GO:0014005) |
3.0 | 12.0 | GO:0002752 | cell surface pattern recognition receptor signaling pathway(GO:0002752) |
0.2 | 10.8 | GO:0003009 | skeletal muscle contraction(GO:0003009) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 22.4 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.2 | 22.0 | GO:0014704 | intercalated disc(GO:0014704) |
0.1 | 18.7 | GO:0009897 | external side of plasma membrane(GO:0009897) |
1.0 | 18.5 | GO:0005861 | troponin complex(GO:0005861) |
0.2 | 17.7 | GO:0016363 | nuclear matrix(GO:0016363) |
0.1 | 15.7 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
0.3 | 11.4 | GO:0008305 | integrin complex(GO:0008305) |
0.0 | 9.8 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.9 | 9.7 | GO:0033093 | Weibel-Palade body(GO:0033093) |
0.4 | 8.7 | GO:0031091 | platelet alpha granule(GO:0031091) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 25.0 | GO:0004012 | phospholipid-translocating ATPase activity(GO:0004012) |
1.1 | 22.0 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
1.3 | 21.1 | GO:0008301 | DNA binding, bending(GO:0008301) |
0.0 | 20.7 | GO:0005509 | calcium ion binding(GO:0005509) |
0.3 | 17.4 | GO:0004715 | non-membrane spanning protein tyrosine kinase activity(GO:0004715) |
3.4 | 16.9 | GO:0005250 | A-type (transient outward) potassium channel activity(GO:0005250) |
0.1 | 15.7 | GO:0001085 | RNA polymerase II transcription factor binding(GO:0001085) |
1.6 | 15.6 | GO:0031014 | troponin T binding(GO:0031014) |
0.4 | 15.5 | GO:0004683 | calmodulin-dependent protein kinase activity(GO:0004683) |
0.2 | 13.8 | GO:0015485 | cholesterol binding(GO:0015485) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 32.9 | PID HDAC CLASSI PATHWAY | Signaling events mediated by HDAC Class I |
0.4 | 26.1 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
1.1 | 17.4 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
0.4 | 12.2 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.1 | 12.0 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 11.7 | PID BCR 5PATHWAY | BCR signaling pathway |
0.1 | 8.2 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.2 | 7.1 | PID FAS PATHWAY | FAS (CD95) signaling pathway |
0.0 | 6.1 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 4.7 | PID INTEGRIN A4B1 PATHWAY | Alpha4 beta1 integrin signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 33.6 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.2 | 28.1 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.2 | 26.5 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.4 | 20.1 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.5 | 19.9 | REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS | Genes involved in Activated NOTCH1 Transmits Signal to the Nucleus |
0.4 | 15.6 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.7 | 13.9 | REACTOME CRMPS IN SEMA3A SIGNALING | Genes involved in CRMPs in Sema3A signaling |
0.1 | 11.8 | REACTOME CELL SURFACE INTERACTIONS AT THE VASCULAR WALL | Genes involved in Cell surface interactions at the vascular wall |
0.4 | 11.2 | REACTOME GENERATION OF SECOND MESSENGER MOLECULES | Genes involved in Generation of second messenger molecules |
0.1 | 9.8 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |