avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Elf3 | mm10_v2_chr1_-_135258449_135258472 | 0.65 | 1.6e-05 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_-_142666816 Show fit | 15.26 |
ENSMUST00000105935.1
|
insulin-like growth factor 2 |
|
chr2_-_28084877 Show fit | 14.61 |
ENSMUST00000028179.8
ENSMUST00000117486.1 ENSMUST00000135472.1 |
ficolin B |
|
chr8_+_72761868 Show fit | 13.21 |
ENSMUST00000058099.8
|
coagulation factor II (thrombin) receptor-like 3 |
|
chr14_+_80000292 Show fit | 9.53 |
ENSMUST00000088735.3
|
olfactomedin 4 |
|
chr17_+_29135056 Show fit | 8.64 |
ENSMUST00000087942.4
|
RAB44, member RAS oncogene family |
|
chr11_+_87793470 Show fit | 7.66 |
ENSMUST00000020779.4
|
myeloperoxidase |
|
chr16_+_17980565 Show fit | 7.48 |
ENSMUST00000075371.3
|
pre-B lymphocyte gene 2 |
|
chr11_+_87793722 Show fit | 7.33 |
ENSMUST00000143021.2
|
myeloperoxidase |
|
chr11_+_115887601 Show fit | 7.14 |
ENSMUST00000167507.2
|
myosin XVB |
|
chr12_+_109544498 Show fit | 6.99 |
ENSMUST00000126289.1
|
maternally expressed 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 15.6 | GO:0070493 | thrombin receptor signaling pathway(GO:0070493) |
1.9 | 15.3 | GO:0038028 | insulin receptor signaling pathway via phosphatidylinositol 3-kinase(GO:0038028) |
5.0 | 15.0 | GO:0002149 | hypochlorous acid metabolic process(GO:0002148) hypochlorous acid biosynthetic process(GO:0002149) |
3.7 | 14.6 | GO:0002752 | cell surface pattern recognition receptor signaling pathway(GO:0002752) |
0.1 | 8.2 | GO:1900026 | positive regulation of substrate adhesion-dependent cell spreading(GO:1900026) |
1.0 | 8.0 | GO:0097210 | response to gonadotropin-releasing hormone(GO:0097210) cellular response to gonadotropin-releasing hormone(GO:0097211) |
0.1 | 7.5 | GO:0042100 | B cell proliferation(GO:0042100) |
0.1 | 7.1 | GO:1902476 | chloride transmembrane transport(GO:1902476) |
0.2 | 7.0 | GO:0008340 | determination of adult lifespan(GO:0008340) |
0.9 | 6.9 | GO:0045743 | positive regulation of fibroblast growth factor receptor signaling pathway(GO:0045743) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 15.0 | GO:0005766 | primary lysosome(GO:0005766) azurophil granule(GO:0042582) |
1.1 | 14.6 | GO:0031232 | extrinsic component of external side of plasma membrane(GO:0031232) |
1.0 | 9.5 | GO:0042581 | specific granule(GO:0042581) |
0.1 | 8.3 | GO:0031985 | Golgi cisterna(GO:0031985) |
0.0 | 8.1 | GO:0005903 | brush border(GO:0005903) |
0.3 | 8.0 | GO:0031307 | integral component of mitochondrial outer membrane(GO:0031307) |
0.1 | 7.0 | GO:0034707 | chloride channel complex(GO:0034707) |
0.0 | 6.5 | GO:0032993 | protein-DNA complex(GO:0032993) |
0.0 | 5.9 | GO:0031965 | nuclear membrane(GO:0031965) |
0.0 | 5.7 | GO:0005769 | early endosome(GO:0005769) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 15.3 | GO:0043539 | protein serine/threonine kinase activator activity(GO:0043539) |
0.2 | 15.0 | GO:0004601 | peroxidase activity(GO:0004601) |
1.6 | 14.6 | GO:0033691 | sialic acid binding(GO:0033691) |
3.3 | 13.2 | GO:0015057 | thrombin receptor activity(GO:0015057) |
0.3 | 10.6 | GO:0043325 | phosphatidylinositol-3,4-bisphosphate binding(GO:0043325) |
0.2 | 10.0 | GO:0050699 | WW domain binding(GO:0050699) |
0.0 | 7.3 | GO:0003924 | GTPase activity(GO:0003924) |
0.2 | 6.9 | GO:0017134 | fibroblast growth factor binding(GO:0017134) |
2.0 | 6.0 | GO:0046592 | polyamine oxidase activity(GO:0046592) spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901) |
0.1 | 6.0 | GO:0097110 | scaffold protein binding(GO:0097110) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 17.1 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.2 | 15.3 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.6 | 11.4 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
0.2 | 9.2 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.0 | 6.7 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 4.7 | PID ARF6 PATHWAY | Arf6 signaling events |
0.1 | 4.4 | PID RHOA PATHWAY | RhoA signaling pathway |
0.0 | 3.2 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.0 | 3.0 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.1 | 2.4 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 15.3 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.2 | 11.2 | REACTOME THROMBIN SIGNALLING THROUGH PROTEINASE ACTIVATED RECEPTORS PARS | Genes involved in Thrombin signalling through proteinase activated receptors (PARs) |
0.1 | 8.7 | REACTOME O LINKED GLYCOSYLATION OF MUCINS | Genes involved in O-linked glycosylation of mucins |
0.4 | 6.0 | REACTOME METABOLISM OF POLYAMINES | Genes involved in Metabolism of polyamines |
0.1 | 5.8 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
1.3 | 5.4 | REACTOME BINDING AND ENTRY OF HIV VIRION | Genes involved in Binding and entry of HIV virion |
0.0 | 4.1 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.1 | 4.0 | REACTOME DEPOSITION OF NEW CENPA CONTAINING NUCLEOSOMES AT THE CENTROMERE | Genes involved in Deposition of New CENPA-containing Nucleosomes at the Centromere |
0.0 | 3.3 | REACTOME ACTIVATION OF THE MRNA UPON BINDING OF THE CAP BINDING COMPLEX AND EIFS AND SUBSEQUENT BINDING TO 43S | Genes involved in Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S |
0.0 | 3.3 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |