avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Ep300 | mm10_v2_chr15_+_81586206_81586250 | -0.70 | 1.6e-06 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_102658640 Show fit | 6.97 |
ENSMUST00000080210.3
|
solute carrier family 1 (glial high affinity glutamate transporter), member 2 |
|
chr2_+_102659213 Show fit | 3.97 |
ENSMUST00000111213.1
|
solute carrier family 1 (glial high affinity glutamate transporter), member 2 |
|
chr9_-_22002599 Show fit | 3.32 |
ENSMUST00000115336.2
ENSMUST00000044926.5 |
coiled-coil domain containing 151 |
|
chr11_+_98348404 Show fit | 3.00 |
ENSMUST00000078694.6
|
protein phosphatase 1, regulatory (inhibitor) subunit 1B |
|
chr12_-_57546121 Show fit | 2.39 |
ENSMUST00000044380.6
|
forkhead box A1 |
|
chr19_-_46148369 Show fit | 2.03 |
ENSMUST00000026259.9
|
paired-like homeodomain transcription factor 3 |
|
chr2_+_25054355 Show fit | 1.77 |
ENSMUST00000100334.4
ENSMUST00000152122.1 ENSMUST00000116574.3 ENSMUST00000006646.8 |
NMDA receptor synaptonuclear signaling and neuronal migration factor |
|
chr19_+_44989073 Show fit | 1.76 |
ENSMUST00000026225.8
|
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G |
|
chr12_+_78226627 Show fit | 1.71 |
ENSMUST00000110388.2
ENSMUST00000052472.4 |
gephyrin |
|
chr2_+_25054396 Show fit | 1.67 |
ENSMUST00000102931.4
ENSMUST00000074422.7 ENSMUST00000132172.1 ENSMUST00000114388.1 ENSMUST00000114386.1 |
NMDA receptor synaptonuclear signaling and neuronal migration factor |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.6 | 10.9 | GO:0070777 | D-aspartate transport(GO:0070777) D-aspartate import(GO:0070779) |
0.9 | 3.4 | GO:0099527 | postsynapse to nucleus signaling pathway(GO:0099527) |
0.2 | 3.3 | GO:0036158 | outer dynein arm assembly(GO:0036158) |
0.0 | 3.2 | GO:1902653 | cholesterol biosynthetic process(GO:0006695) secondary alcohol biosynthetic process(GO:1902653) |
0.7 | 3.0 | GO:0007621 | negative regulation of female receptivity(GO:0007621) |
0.1 | 3.0 | GO:0045722 | positive regulation of gluconeogenesis(GO:0045722) |
0.0 | 2.6 | GO:0007601 | visual perception(GO:0007601) |
0.8 | 2.4 | GO:0061144 | alveolar secondary septum development(GO:0061144) |
0.1 | 2.2 | GO:0048742 | regulation of skeletal muscle fiber development(GO:0048742) |
0.7 | 2.0 | GO:1904933 | regulation of cell proliferation in midbrain(GO:1904933) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 11.0 | GO:0030673 | axolemma(GO:0030673) |
0.0 | 3.6 | GO:0005902 | microvillus(GO:0005902) |
0.1 | 3.4 | GO:0005719 | nuclear euchromatin(GO:0005719) |
0.0 | 3.3 | GO:0005930 | axoneme(GO:0005930) |
0.1 | 2.8 | GO:0005763 | organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763) |
0.2 | 1.9 | GO:0032584 | growth cone membrane(GO:0032584) |
0.0 | 1.7 | GO:0060077 | inhibitory synapse(GO:0060077) |
0.0 | 1.5 | GO:0005811 | lipid particle(GO:0005811) |
0.0 | 1.4 | GO:0031588 | nucleotide-activated protein kinase complex(GO:0031588) |
0.1 | 1.3 | GO:0042612 | MHC class I protein complex(GO:0042612) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 10.9 | GO:0015501 | glutamate:sodium symporter activity(GO:0015501) |
0.0 | 3.4 | GO:0048306 | calcium-dependent protein binding(GO:0048306) |
0.0 | 3.3 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.3 | 3.2 | GO:0004128 | cytochrome-b5 reductase activity, acting on NAD(P)H(GO:0004128) |
1.0 | 3.0 | GO:0031752 | D4 dopamine receptor binding(GO:0031751) D5 dopamine receptor binding(GO:0031752) |
0.1 | 3.0 | GO:0004864 | protein phosphatase inhibitor activity(GO:0004864) |
0.9 | 2.6 | GO:0005118 | sevenless binding(GO:0005118) |
0.6 | 1.7 | GO:0008940 | nitrate reductase activity(GO:0008940) |
0.3 | 1.4 | GO:0000309 | nicotinamide-nucleotide adenylyltransferase activity(GO:0000309) nicotinate-nucleotide adenylyltransferase activity(GO:0004515) |
0.2 | 1.4 | GO:0008607 | phosphorylase kinase regulator activity(GO:0008607) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.8 | PID TRAIL PATHWAY | TRAIL signaling pathway |
0.0 | 2.4 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 2.2 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.0 | 1.4 | PID E2F PATHWAY | E2F transcription factor network |
0.2 | 1.2 | ST IL 13 PATHWAY | Interleukin 13 (IL-13) Pathway |
0.0 | 0.8 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 0.8 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
0.0 | 0.7 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
0.0 | 0.7 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.0 | 0.7 | PID P38 MKK3 6PATHWAY | p38 MAPK signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 12.0 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.1 | 6.5 | REACTOME METABOLISM OF VITAMINS AND COFACTORS | Genes involved in Metabolism of vitamins and cofactors |
0.1 | 3.3 | REACTOME DARPP 32 EVENTS | Genes involved in DARPP-32 events |
0.1 | 1.6 | REACTOME CALNEXIN CALRETICULIN CYCLE | Genes involved in Calnexin/calreticulin cycle |
0.1 | 1.4 | REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX | Genes involved in CDC6 association with the ORC:origin complex |
0.1 | 1.4 | REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK | Genes involved in Regulation of Rheb GTPase activity by AMPK |
0.1 | 1.3 | REACTOME MITOCHONDRIAL TRNA AMINOACYLATION | Genes involved in Mitochondrial tRNA aminoacylation |
0.0 | 1.3 | REACTOME GLYCOSPHINGOLIPID METABOLISM | Genes involved in Glycosphingolipid metabolism |
0.0 | 0.9 | REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S | Genes involved in Activation of Chaperone Genes by XBP1(S) |
0.0 | 0.9 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |