avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Epas1 | mm10_v2_chr17_+_86753900_86753914 | 0.33 | 4.9e-02 | Click! |
Bcl3 | mm10_v2_chr7_-_19822698_19822776 | -0.09 | 6.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr17_-_28560704 Show fit | 13.10 |
ENSMUST00000114785.1
ENSMUST00000025062.3 |
colipase, pancreatic |
|
chr14_-_60177482 Show fit | 12.25 |
ENSMUST00000140924.1
|
ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 |
|
chr14_+_55765956 Show fit | 9.80 |
ENSMUST00000057569.3
|
leukotriene B4 receptor 1 |
|
chr8_+_79028587 Show fit | 8.84 |
ENSMUST00000119254.1
|
zinc finger protein 827 |
|
chr5_-_134747241 Show fit | 8.59 |
ENSMUST00000015138.9
|
elastin |
|
chr10_+_127725392 Show fit | 7.94 |
ENSMUST00000026466.3
|
tachykinin 2 |
|
chr3_+_51661167 Show fit | 7.73 |
ENSMUST00000099106.3
|
microsomal glutathione S-transferase 2 |
|
chr8_+_79028317 Show fit | 6.21 |
ENSMUST00000087927.4
ENSMUST00000098614.2 |
zinc finger protein 827 |
|
chr3_-_132950043 Show fit | 5.77 |
ENSMUST00000117164.1
ENSMUST00000093971.4 ENSMUST00000042729.9 ENSMUST00000042744.9 ENSMUST00000117811.1 |
nephronectin |
|
chr3_+_51661209 Show fit | 4.89 |
ENSMUST00000161590.1
|
microsomal glutathione S-transferase 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 14.4 | GO:0061091 | regulation of phospholipid translocation(GO:0061091) positive regulation of phospholipid translocation(GO:0061092) |
0.3 | 13.5 | GO:0032094 | response to food(GO:0032094) |
0.5 | 12.6 | GO:0019370 | leukotriene biosynthetic process(GO:0019370) |
0.1 | 10.2 | GO:0007218 | neuropeptide signaling pathway(GO:0007218) |
1.6 | 7.9 | GO:0007217 | tachykinin receptor signaling pathway(GO:0007217) |
0.0 | 7.2 | GO:0030833 | regulation of actin filament polymerization(GO:0030833) |
1.4 | 5.8 | GO:2000721 | positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation(GO:2000721) |
0.3 | 5.8 | GO:0051988 | regulation of attachment of spindle microtubules to kinetochore(GO:0051988) |
0.5 | 4.4 | GO:0032264 | IMP salvage(GO:0032264) |
0.4 | 4.4 | GO:0048170 | positive regulation of long-term neuronal synaptic plasticity(GO:0048170) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.2 | GO:0005635 | nuclear envelope(GO:0005635) |
2.1 | 8.6 | GO:0071953 | elastic fiber(GO:0071953) |
0.0 | 7.7 | GO:0045121 | membrane raft(GO:0045121) membrane microdomain(GO:0098857) |
0.2 | 6.0 | GO:0035371 | microtubule plus-end(GO:0035371) |
0.8 | 5.8 | GO:0030485 | smooth muscle contractile fiber(GO:0030485) |
1.1 | 5.3 | GO:0042583 | chromaffin granule(GO:0042583) |
0.0 | 4.9 | GO:0030018 | Z disc(GO:0030018) |
0.1 | 4.7 | GO:0097440 | apical dendrite(GO:0097440) |
0.1 | 4.3 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
1.4 | 4.2 | GO:0034673 | inhibin-betaglycan-ActRII complex(GO:0034673) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 14.4 | GO:0004012 | phospholipid-translocating ATPase activity(GO:0004012) |
3.2 | 12.6 | GO:0004464 | leukotriene-C4 synthase activity(GO:0004464) |
2.4 | 9.8 | GO:0004974 | leukotriene receptor activity(GO:0004974) |
0.1 | 8.5 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.0 | 7.0 | GO:0008047 | enzyme activator activity(GO:0008047) |
0.1 | 5.6 | GO:0015459 | potassium channel regulator activity(GO:0015459) |
0.4 | 5.3 | GO:0002151 | G-quadruplex RNA binding(GO:0002151) |
0.7 | 5.2 | GO:0044729 | hemi-methylated DNA-binding(GO:0044729) |
0.2 | 5.1 | GO:0004190 | aspartic-type endopeptidase activity(GO:0004190) |
0.5 | 4.4 | GO:0003876 | AMP deaminase activity(GO:0003876) adenosine-phosphate deaminase activity(GO:0047623) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.1 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 7.0 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.1 | 6.8 | PID P73PATHWAY | p73 transcription factor network |
0.1 | 4.9 | PID IL8 CXCR2 PATHWAY | IL8- and CXCR2-mediated signaling events |
0.0 | 4.6 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 4.0 | PID LKB1 PATHWAY | LKB1 signaling events |
0.1 | 2.6 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
0.1 | 2.1 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
0.1 | 1.9 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.0 | 1.8 | ST PHOSPHOINOSITIDE 3 KINASE PATHWAY | PI3K Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 14.4 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.3 | 11.3 | REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D | Genes involved in Metabolism of steroid hormones and vitamins A and D |
0.1 | 4.6 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.1 | 4.5 | REACTOME TRAFFICKING OF AMPA RECEPTORS | Genes involved in Trafficking of AMPA receptors |
0.2 | 4.4 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.5 | 4.2 | REACTOME GLYCOPROTEIN HORMONES | Genes involved in Glycoprotein hormones |
0.1 | 3.4 | REACTOME PRE NOTCH TRANSCRIPTION AND TRANSLATION | Genes involved in Pre-NOTCH Transcription and Translation |
0.1 | 3.3 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.1 | 3.2 | REACTOME LYSOSOME VESICLE BIOGENESIS | Genes involved in Lysosome Vesicle Biogenesis |
0.1 | 3.2 | REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION | Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression |