avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Esrrg | mm10_v2_chr1_+_187997835_187997882 | 0.51 | 1.6e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_-_43524462 Show fit | 4.92 |
ENSMUST00000026196.7
|
glutamate oxaloacetate transaminase 1, soluble |
|
chr4_-_107307118 Show fit | 4.61 |
ENSMUST00000126291.1
ENSMUST00000106748.1 ENSMUST00000129138.1 ENSMUST00000082426.3 |
deiodinase, iodothyronine, type I |
|
chr18_+_45268876 Show fit | 4.50 |
ENSMUST00000183850.1
ENSMUST00000066890.7 |
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 |
|
chr9_+_55326913 Show fit | 2.68 |
ENSMUST00000085754.3
ENSMUST00000034862.4 |
expressed sequence AI118078 |
|
chr13_+_84222286 Show fit | 1.85 |
ENSMUST00000057495.8
|
transmembrane protein 161B |
|
chr17_-_32420965 Show fit | 1.81 |
ENSMUST00000170392.1
|
peptidoglycan recognition protein 2 |
|
chr2_-_25501717 Show fit | 1.62 |
ENSMUST00000015227.3
|
complement component 8, gamma polypeptide |
|
chr5_-_92328068 Show fit | 1.53 |
ENSMUST00000113093.3
|
chemokine (C-X-C motif) ligand 9 |
|
chr9_-_107668967 Show fit | 1.35 |
ENSMUST00000177567.1
|
solute carrier family 38, member 3 |
|
chrX_-_72656135 Show fit | 1.33 |
ENSMUST00000055966.6
|
gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.9 | 5.7 | GO:0006106 | fumarate metabolic process(GO:0006106) |
0.0 | 4.6 | GO:0042446 | hormone biosynthetic process(GO:0042446) |
0.6 | 4.5 | GO:0098914 | membrane repolarization during atrial cardiac muscle cell action potential(GO:0098914) |
0.1 | 2.1 | GO:0010257 | NADH dehydrogenase complex assembly(GO:0010257) mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031) |
0.4 | 1.8 | GO:2000795 | negative regulation of epithelial cell proliferation involved in lung morphogenesis(GO:2000795) |
0.4 | 1.8 | GO:0000270 | peptidoglycan metabolic process(GO:0000270) peptidoglycan catabolic process(GO:0009253) negative regulation of natural killer cell differentiation(GO:0032824) negative regulation of natural killer cell differentiation involved in immune response(GO:0032827) |
0.1 | 1.7 | GO:0010818 | T cell chemotaxis(GO:0010818) |
0.3 | 1.6 | GO:0001980 | regulation of systemic arterial blood pressure by ischemic conditions(GO:0001980) |
0.1 | 1.6 | GO:0006957 | complement activation, alternative pathway(GO:0006957) |
0.5 | 1.4 | GO:2000485 | positive regulation of transcription from RNA polymerase II promoter in response to acidic pH(GO:0061402) regulation of glutamine transport(GO:2000485) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.1 | GO:0043679 | axon terminus(GO:0043679) |
0.1 | 4.5 | GO:0005790 | smooth endoplasmic reticulum(GO:0005790) |
0.4 | 1.8 | GO:0045283 | mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281) fumarate reductase complex(GO:0045283) |
0.1 | 1.7 | GO:0044300 | cerebellar mossy fiber(GO:0044300) |
0.1 | 1.6 | GO:0005579 | membrane attack complex(GO:0005579) |
0.1 | 1.4 | GO:1990635 | proximal dendrite(GO:1990635) |
0.0 | 1.4 | GO:0005747 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.3 | 1.3 | GO:0036019 | endolysosome(GO:0036019) |
0.2 | 1.3 | GO:0045261 | mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275) proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261) |
0.1 | 1.3 | GO:0005750 | mitochondrial respiratory chain complex III(GO:0005750) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.6 | 4.9 | GO:0070546 | L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069) L-phenylalanine aminotransferase activity(GO:0070546) L-phenylalanine:2-oxoglutarate aminotransferase activity(GO:0080130) |
1.5 | 4.6 | GO:0004800 | thyroxine 5'-deiodinase activity(GO:0004800) |
1.1 | 4.5 | GO:0016286 | small conductance calcium-activated potassium channel activity(GO:0016286) |
0.6 | 1.8 | GO:0008177 | succinate dehydrogenase (ubiquinone) activity(GO:0008177) |
0.4 | 1.8 | GO:0008745 | N-acetylmuramoyl-L-alanine amidase activity(GO:0008745) peptidoglycan receptor activity(GO:0016019) |
0.0 | 1.8 | GO:0001106 | RNA polymerase II transcription corepressor activity(GO:0001106) |
0.3 | 1.7 | GO:0048248 | CXCR3 chemokine receptor binding(GO:0048248) |
0.1 | 1.6 | GO:0019841 | retinol binding(GO:0019841) |
0.5 | 1.4 | GO:0015182 | L-asparagine transmembrane transporter activity(GO:0015182) |
0.0 | 1.4 | GO:0043531 | ADP binding(GO:0043531) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.8 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 1.7 | PID TGFBR PATHWAY | TGF-beta receptor signaling |
0.0 | 1.5 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.0 | 1.2 | PID ERBB1 DOWNSTREAM PATHWAY | ErbB1 downstream signaling |
0.0 | 0.7 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
0.0 | 0.7 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.0 | 0.5 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
0.0 | 0.5 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.0 | 0.4 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 0.3 | ST JNK MAPK PATHWAY | JNK MAPK Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 5.3 | REACTOME METABOLISM OF POLYAMINES | Genes involved in Metabolism of polyamines |
0.0 | 5.0 | REACTOME POTASSIUM CHANNELS | Genes involved in Potassium Channels |
0.2 | 3.8 | REACTOME AMINE DERIVED HORMONES | Genes involved in Amine-derived hormones |
0.0 | 3.1 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.1 | 2.0 | REACTOME CITRIC ACID CYCLE TCA CYCLE | Genes involved in Citric acid cycle (TCA cycle) |
0.1 | 1.8 | REACTOME RNA POL III TRANSCRIPTION TERMINATION | Genes involved in RNA Polymerase III Transcription Termination |
0.0 | 1.7 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.0 | 1.6 | REACTOME COMPLEMENT CASCADE | Genes involved in Complement cascade |
0.1 | 1.5 | REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLING | Genes involved in Formation of ATP by chemiosmotic coupling |
0.0 | 1.4 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |