avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Etv4 | mm10_v2_chr11_-_101785252_101785371 | 0.79 | 1.2e-08 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_+_87793470 Show fit | 19.07 |
ENSMUST00000020779.4
|
myeloperoxidase |
|
chr11_+_87793722 Show fit | 16.65 |
ENSMUST00000143021.2
|
myeloperoxidase |
|
chr7_+_24370255 Show fit | 10.25 |
ENSMUST00000171904.1
|
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 |
|
chr1_+_40515362 Show fit | 10.01 |
ENSMUST00000027237.5
|
interleukin 18 receptor accessory protein |
|
chr2_-_28084877 Show fit | 9.36 |
ENSMUST00000028179.8
ENSMUST00000117486.1 ENSMUST00000135472.1 |
ficolin B |
|
chr9_-_123968683 Show fit | 9.17 |
ENSMUST00000026911.4
|
chemokine (C-C motif) receptor 1 |
|
chr11_-_102469839 Show fit | 8.38 |
ENSMUST00000103086.3
|
integrin alpha 2b |
|
chrX_-_7964166 Show fit | 8.19 |
ENSMUST00000128449.1
|
GATA binding protein 1 |
|
chr8_+_72761868 Show fit | 7.34 |
ENSMUST00000058099.8
|
coagulation factor II (thrombin) receptor-like 3 |
|
chr7_-_127137807 Show fit | 7.24 |
ENSMUST00000049931.5
|
sialophorin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
11.9 | 35.7 | GO:0002148 | hypochlorous acid metabolic process(GO:0002148) hypochlorous acid biosynthetic process(GO:0002149) |
0.2 | 19.2 | GO:0030168 | platelet activation(GO:0030168) |
0.9 | 11.8 | GO:0050862 | positive regulation of T cell receptor signaling pathway(GO:0050862) |
0.9 | 11.1 | GO:0046645 | positive regulation of gamma-delta T cell differentiation(GO:0045588) positive regulation of gamma-delta T cell activation(GO:0046645) |
1.3 | 10.4 | GO:0036506 | maintenance of unfolded protein(GO:0036506) tail-anchored membrane protein insertion into ER membrane(GO:0071816) maintenance of unfolded protein involved in ERAD pathway(GO:1904378) |
1.0 | 10.4 | GO:0043313 | regulation of neutrophil degranulation(GO:0043313) |
2.3 | 9.4 | GO:0002752 | cell surface pattern recognition receptor signaling pathway(GO:0002752) |
3.1 | 9.3 | GO:0045660 | positive regulation of neutrophil differentiation(GO:0045660) |
0.5 | 9.2 | GO:0001833 | inner cell mass cell proliferation(GO:0001833) |
1.8 | 8.9 | GO:0051140 | regulation of NK T cell proliferation(GO:0051140) positive regulation of NK T cell proliferation(GO:0051142) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.1 | 33.5 | GO:0005766 | primary lysosome(GO:0005766) azurophil granule(GO:0042582) |
0.2 | 14.1 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.0 | 13.5 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.1 | 13.2 | GO:0005884 | actin filament(GO:0005884) |
0.2 | 13.1 | GO:0000307 | cyclin-dependent protein kinase holoenzyme complex(GO:0000307) |
0.3 | 11.1 | GO:0031430 | M band(GO:0031430) |
0.6 | 10.8 | GO:0031235 | intrinsic component of the cytoplasmic side of the plasma membrane(GO:0031235) |
1.5 | 10.4 | GO:0071818 | BAT3 complex(GO:0071818) ER membrane insertion complex(GO:0072379) |
0.7 | 9.4 | GO:0031232 | extrinsic component of external side of plasma membrane(GO:0031232) |
0.2 | 9.4 | GO:0002102 | podosome(GO:0002102) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 35.5 | GO:0004601 | peroxidase activity(GO:0004601) |
0.7 | 15.4 | GO:1990381 | ubiquitin-specific protease binding(GO:1990381) |
0.1 | 13.1 | GO:0017124 | SH3 domain binding(GO:0017124) |
0.0 | 11.4 | GO:0030695 | GTPase regulator activity(GO:0030695) |
2.6 | 10.3 | GO:0016286 | small conductance calcium-activated potassium channel activity(GO:0016286) |
0.2 | 10.3 | GO:0004693 | cyclin-dependent protein serine/threonine kinase activity(GO:0004693) |
0.3 | 10.0 | GO:0008187 | poly-pyrimidine tract binding(GO:0008187) |
0.1 | 9.5 | GO:0030507 | spectrin binding(GO:0030507) |
1.0 | 9.4 | GO:0033691 | sialic acid binding(GO:0033691) |
1.0 | 9.3 | GO:0016176 | superoxide-generating NADPH oxidase activator activity(GO:0016176) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 42.0 | PID IL23 PATHWAY | IL23-mediated signaling events |
1.0 | 19.7 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
0.4 | 15.9 | PID EPHRINB REV PATHWAY | Ephrin B reverse signaling |
0.2 | 15.3 | PID PI3KCI PATHWAY | Class I PI3K signaling events |
0.2 | 11.1 | PID AURORA B PATHWAY | Aurora B signaling |
0.1 | 11.0 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.2 | 10.7 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
0.1 | 10.5 | PID TELOMERASE PATHWAY | Regulation of Telomerase |
0.1 | 10.1 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.2 | 9.2 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 25.8 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.9 | 15.9 | REACTOME P130CAS LINKAGE TO MAPK SIGNALING FOR INTEGRINS | Genes involved in p130Cas linkage to MAPK signaling for integrins |
0.1 | 13.9 | REACTOME POTASSIUM CHANNELS | Genes involved in Potassium Channels |
0.3 | 13.3 | REACTOME GPVI MEDIATED ACTIVATION CASCADE | Genes involved in GPVI-mediated activation cascade |
0.1 | 11.4 | REACTOME G ALPHA1213 SIGNALLING EVENTS | Genes involved in G alpha (12/13) signalling events |
0.2 | 9.9 | REACTOME THROMBIN SIGNALLING THROUGH PROTEINASE ACTIVATED RECEPTORS PARS | Genes involved in Thrombin signalling through proteinase activated receptors (PARs) |
0.3 | 9.4 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |
0.6 | 8.0 | REACTOME THE NLRP3 INFLAMMASOME | Genes involved in The NLRP3 inflammasome |
0.1 | 7.9 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.2 | 7.6 | REACTOME G1 PHASE | Genes involved in G1 Phase |