avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Fli1 | mm10_v2_chr9_-_32542861_32543008 | -0.70 | 1.6e-06 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_-_40187277 Show fit | 30.06 |
ENSMUST00000051846.6
|
cytochrome P450, family 2, subfamily c, polypeptide 70 |
|
chr8_-_24576297 Show fit | 24.44 |
ENSMUST00000033953.7
ENSMUST00000121992.1 |
indoleamine 2,3-dioxygenase 2 |
|
chr10_+_128971191 Show fit | 22.49 |
ENSMUST00000181142.1
|
RIKEN cDNA 9030616G12 gene |
|
chr1_-_175491130 Show fit | 17.15 |
ENSMUST00000027812.5
|
regulator of G protein signaling 7 |
|
chr9_-_57683644 Show fit | 16.50 |
ENSMUST00000034860.3
|
cytochrome P450, family 1, subfamily a, polypeptide 2 |
|
chrX_-_136868537 Show fit | 13.70 |
ENSMUST00000058814.6
|
RAB9B, member RAS oncogene family |
|
chr7_-_26939377 Show fit | 12.24 |
ENSMUST00000170227.1
|
cytochrome P450, family 2, subfamily a, polypeptide 22 |
|
chr17_-_32424139 Show fit | 11.34 |
ENSMUST00000114455.1
|
peptidoglycan recognition protein 2 |
|
chr19_+_46131888 Show fit | 7.23 |
ENSMUST00000043739.3
|
elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3 |
|
chr13_-_4523322 Show fit | 6.12 |
ENSMUST00000080361.5
ENSMUST00000078239.3 |
aldo-keto reductase family 1, member C20 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 42.3 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
2.2 | 24.4 | GO:0006569 | tryptophan catabolic process(GO:0006569) tryptophan catabolic process to kynurenine(GO:0019441) indole-containing compound catabolic process(GO:0042436) indolalkylamine catabolic process(GO:0046218) kynurenine metabolic process(GO:0070189) |
0.1 | 17.2 | GO:0008277 | regulation of G-protein coupled receptor protein signaling pathway(GO:0008277) |
5.5 | 16.5 | GO:0018894 | dibenzo-p-dioxin metabolic process(GO:0018894) |
0.2 | 13.7 | GO:0042147 | retrograde transport, endosome to Golgi(GO:0042147) |
2.3 | 11.3 | GO:0032827 | peptidoglycan metabolic process(GO:0000270) peptidoglycan catabolic process(GO:0009253) negative regulation of natural killer cell differentiation(GO:0032824) negative regulation of natural killer cell differentiation involved in immune response(GO:0032827) |
0.6 | 7.2 | GO:0019368 | fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626) |
0.1 | 6.2 | GO:1900181 | negative regulation of protein localization to nucleus(GO:1900181) |
0.0 | 6.1 | GO:0006694 | steroid biosynthetic process(GO:0006694) |
0.3 | 5.5 | GO:0051923 | sulfation(GO:0051923) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 17.2 | GO:0044292 | dendrite terminus(GO:0044292) |
0.2 | 13.1 | GO:0045335 | phagocytic vesicle(GO:0045335) |
0.1 | 8.2 | GO:0005811 | lipid particle(GO:0005811) |
0.0 | 7.2 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
0.3 | 5.3 | GO:0045180 | basal cortex(GO:0045180) |
0.1 | 5.0 | GO:0031903 | peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903) |
0.2 | 4.5 | GO:1902711 | GABA-A receptor complex(GO:1902711) |
0.0 | 4.3 | GO:0016324 | apical plasma membrane(GO:0016324) |
1.0 | 4.1 | GO:0097487 | multivesicular body, internal vesicle(GO:0097487) |
0.5 | 4.0 | GO:0045098 | type III intermediate filament(GO:0045098) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 42.3 | GO:0008392 | arachidonic acid epoxygenase activity(GO:0008392) |
8.1 | 24.4 | GO:0033754 | indoleamine 2,3-dioxygenase activity(GO:0033754) |
0.8 | 18.0 | GO:0031681 | G-protein beta-subunit binding(GO:0031681) |
2.7 | 16.5 | GO:0034875 | oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor(GO:0033695) caffeine oxidase activity(GO:0034875) |
0.2 | 13.3 | GO:0019003 | GDP binding(GO:0019003) |
2.3 | 11.3 | GO:0008745 | N-acetylmuramoyl-L-alanine amidase activity(GO:0008745) peptidoglycan receptor activity(GO:0016019) |
0.3 | 9.2 | GO:1900750 | glutathione binding(GO:0043295) oligopeptide binding(GO:1900750) |
0.6 | 7.2 | GO:0009922 | fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338) |
0.3 | 6.1 | GO:0004033 | aldo-keto reductase (NADP) activity(GO:0004033) |
0.8 | 5.5 | GO:0004027 | alcohol sulfotransferase activity(GO:0004027) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.6 | ST JNK MAPK PATHWAY | JNK MAPK Pathway |
0.0 | 6.1 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 5.6 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.1 | 5.5 | PID E2F PATHWAY | E2F transcription factor network |
0.1 | 4.8 | PID CD8 TCR DOWNSTREAM PATHWAY | Downstream signaling in naïve CD8+ T cells |
0.2 | 4.1 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.1 | 3.4 | PID BMP PATHWAY | BMP receptor signaling |
0.0 | 2.5 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 2.1 | PID P75 NTR PATHWAY | p75(NTR)-mediated signaling |
0.1 | 2.0 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 24.4 | REACTOME TRYPTOPHAN CATABOLISM | Genes involved in Tryptophan catabolism |
0.1 | 17.2 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
5.5 | 16.5 | REACTOME XENOBIOTICS | Genes involved in Xenobiotics |
0.2 | 9.0 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.2 | 7.2 | REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS | Genes involved in Synthesis of very long-chain fatty acyl-CoAs |
0.1 | 6.2 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.2 | 5.7 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |
0.4 | 5.5 | REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES | Genes involved in Cytosolic sulfonation of small molecules |
0.2 | 4.0 | REACTOME PYRIMIDINE CATABOLISM | Genes involved in Pyrimidine catabolism |
0.2 | 3.7 | REACTOME SHC1 EVENTS IN EGFR SIGNALING | Genes involved in SHC1 events in EGFR signaling |