avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Fos | mm10_v2_chr12_+_85473883_85473896 | 0.55 | 5.0e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_102365111 Show fit | 20.64 |
ENSMUST00000006749.9
|
solute carrier family 4 (anion exchanger), member 1 |
|
chr2_+_84734050 Show fit | 18.20 |
ENSMUST00000090729.2
|
yippee-like 4 (Drosophila) |
|
chr1_-_132390301 Show fit | 18.10 |
ENSMUST00000132435.1
|
transmembrane and coiled-coil domains 2 |
|
chr14_+_80000292 Show fit | 16.34 |
ENSMUST00000088735.3
|
olfactomedin 4 |
|
chr7_-_45920830 Show fit | 15.60 |
ENSMUST00000164119.1
|
epithelial membrane protein 3 |
|
chr7_+_24370255 Show fit | 15.47 |
ENSMUST00000171904.1
|
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 |
|
chr1_+_174172738 Show fit | 15.45 |
ENSMUST00000027817.7
|
spectrin alpha, erythrocytic 1 |
|
chr11_+_116533257 Show fit | 12.66 |
ENSMUST00000154034.1
|
sphingosine kinase 1 |
|
chr11_+_116531744 Show fit | 12.60 |
ENSMUST00000106387.2
ENSMUST00000100201.3 |
sphingosine kinase 1 |
|
chr7_+_110772604 Show fit | 11.82 |
ENSMUST00000005829.6
|
adenosine monophosphate deaminase 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.2 | 25.3 | GO:0019371 | cyclooxygenase pathway(GO:0019371) |
4.2 | 21.1 | GO:0030951 | establishment or maintenance of microtubule cytoskeleton polarity(GO:0030951) |
0.7 | 20.6 | GO:0046685 | response to arsenic-containing substance(GO:0046685) |
1.0 | 20.1 | GO:0032060 | bleb assembly(GO:0032060) |
0.3 | 20.0 | GO:1900026 | positive regulation of substrate adhesion-dependent cell spreading(GO:1900026) |
3.7 | 18.7 | GO:0000738 | DNA catabolic process, exonucleolytic(GO:0000738) |
1.3 | 17.6 | GO:0030388 | fructose 1,6-bisphosphate metabolic process(GO:0030388) |
0.4 | 16.2 | GO:0007026 | negative regulation of microtubule depolymerization(GO:0007026) |
1.2 | 16.0 | GO:0050862 | positive regulation of T cell receptor signaling pathway(GO:0050862) |
0.4 | 15.5 | GO:0006779 | porphyrin-containing compound biosynthetic process(GO:0006779) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 21.5 | GO:0008021 | synaptic vesicle(GO:0008021) |
3.0 | 21.1 | GO:0005638 | lamin filament(GO:0005638) |
0.4 | 18.7 | GO:0015030 | Cajal body(GO:0015030) |
1.1 | 16.8 | GO:0042581 | specific granule(GO:0042581) |
2.6 | 15.5 | GO:0032437 | cuticular plate(GO:0032437) |
0.8 | 14.7 | GO:0035686 | sperm fibrous sheath(GO:0035686) |
0.1 | 13.2 | GO:0014704 | intercalated disc(GO:0014704) |
0.1 | 12.5 | GO:0005875 | microtubule associated complex(GO:0005875) |
0.1 | 11.2 | GO:0019897 | extrinsic component of plasma membrane(GO:0019897) |
0.1 | 10.8 | GO:0055037 | recycling endosome(GO:0055037) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.6 | 25.3 | GO:0017050 | sphinganine kinase activity(GO:0008481) D-erythro-sphingosine kinase activity(GO:0017050) |
0.6 | 21.7 | GO:0008157 | protein phosphatase 1 binding(GO:0008157) |
0.1 | 21.2 | GO:0008017 | microtubule binding(GO:0008017) |
1.0 | 20.9 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
4.7 | 18.7 | GO:0008859 | exoribonuclease II activity(GO:0008859) |
0.2 | 16.0 | GO:0035591 | signaling adaptor activity(GO:0035591) |
3.9 | 15.5 | GO:0016286 | small conductance calcium-activated potassium channel activity(GO:0016286) |
1.8 | 14.7 | GO:0004332 | fructose-bisphosphate aldolase activity(GO:0004332) |
0.3 | 13.3 | GO:0001965 | G-protein alpha-subunit binding(GO:0001965) |
1.3 | 11.8 | GO:0047623 | AMP deaminase activity(GO:0003876) adenosine-phosphate deaminase activity(GO:0047623) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 28.7 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.9 | 25.3 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
0.2 | 12.6 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.3 | 11.7 | PID AVB3 OPN PATHWAY | Osteopontin-mediated events |
0.7 | 10.6 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
0.2 | 10.2 | PID FAK PATHWAY | Signaling events mediated by focal adhesion kinase |
0.1 | 10.0 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.6 | 9.9 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
0.2 | 7.6 | PID THROMBIN PAR1 PATHWAY | PAR1-mediated thrombin signaling events |
0.6 | 7.4 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 30.3 | REACTOME APOPTOTIC CLEAVAGE OF CELLULAR PROTEINS | Genes involved in Apoptotic cleavage of cellular proteins |
0.6 | 27.8 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
0.1 | 21.8 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
0.4 | 16.7 | REACTOME GLUCONEOGENESIS | Genes involved in Gluconeogenesis |
0.2 | 16.4 | REACTOME POTASSIUM CHANNELS | Genes involved in Potassium Channels |
0.3 | 16.2 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.3 | 14.4 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.1 | 13.0 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.6 | 11.8 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.3 | 9.9 | REACTOME GENERATION OF SECOND MESSENGER MOLECULES | Genes involved in Generation of second messenger molecules |