avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Bach2 | mm10_v2_chr4_+_32238950_32238964 | 0.31 | 6.9e-02 | Click! |
Fosl2 | mm10_v2_chr5_+_32136458_32136505 | 0.08 | 6.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_79059872 Show fit | 1.88 |
ENSMUST00000141409.1
|
kinase suppressor of ras 1 |
|
chr17_+_35841668 Show fit | 1.49 |
ENSMUST00000174124.1
|
mediator of DNA damage checkpoint 1 |
|
chr11_-_102365111 Show fit | 1.43 |
ENSMUST00000006749.9
|
solute carrier family 4 (anion exchanger), member 1 |
|
chr7_+_110774240 Show fit | 1.27 |
ENSMUST00000147587.1
|
adenosine monophosphate deaminase 3 |
|
chr8_+_94984399 Show fit | 1.20 |
ENSMUST00000093271.6
|
G protein-coupled receptor 56 |
|
chr7_+_110773658 Show fit | 1.16 |
ENSMUST00000143786.1
|
adenosine monophosphate deaminase 3 |
|
chr11_-_99322943 Show fit | 1.10 |
ENSMUST00000038004.2
|
keratin 25 |
|
chr1_-_132390301 Show fit | 1.09 |
ENSMUST00000132435.1
|
transmembrane and coiled-coil domains 2 |
|
chr12_+_111166485 Show fit | 1.09 |
ENSMUST00000139162.1
|
TNF receptor-associated factor 3 |
|
chr8_-_68121527 Show fit | 1.06 |
ENSMUST00000178529.1
|
predicted gene, 21807 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 3.2 | GO:0032264 | IMP salvage(GO:0032264) |
0.0 | 2.1 | GO:0019933 | cAMP-mediated signaling(GO:0019933) |
0.1 | 1.4 | GO:0014823 | response to activity(GO:0014823) |
0.1 | 1.2 | GO:0008063 | Toll signaling pathway(GO:0008063) |
0.3 | 1.1 | GO:0010536 | positive regulation of activation of Janus kinase activity(GO:0010536) |
0.0 | 1.1 | GO:0045109 | intermediate filament organization(GO:0045109) |
0.2 | 1.0 | GO:0000738 | DNA catabolic process, exonucleolytic(GO:0000738) |
0.2 | 1.0 | GO:0051684 | maintenance of Golgi location(GO:0051684) |
0.0 | 1.0 | GO:0006779 | porphyrin-containing compound biosynthetic process(GO:0006779) |
0.3 | 0.9 | GO:0071460 | cellular response to cell-matrix adhesion(GO:0071460) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.4 | GO:0009925 | basal plasma membrane(GO:0009925) |
0.0 | 1.5 | GO:0055037 | recycling endosome(GO:0055037) |
0.1 | 1.4 | GO:0035631 | CD40 receptor complex(GO:0035631) |
0.2 | 1.1 | GO:0032437 | cuticular plate(GO:0032437) |
0.0 | 1.0 | GO:0015030 | Cajal body(GO:0015030) |
0.3 | 0.9 | GO:0005607 | laminin-2 complex(GO:0005607) |
0.1 | 0.9 | GO:1990635 | proximal dendrite(GO:1990635) |
0.1 | 0.9 | GO:0042599 | lamellar body(GO:0042599) |
0.3 | 0.8 | GO:1990047 | spindle matrix(GO:1990047) |
0.1 | 0.8 | GO:0097444 | spine apparatus(GO:0097444) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 3.2 | GO:0003876 | AMP deaminase activity(GO:0003876) adenosine-phosphate deaminase activity(GO:0047623) |
0.1 | 1.9 | GO:0005078 | MAP-kinase scaffold activity(GO:0005078) |
0.1 | 1.7 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
0.1 | 1.3 | GO:0031996 | thioesterase binding(GO:0031996) |
0.1 | 1.2 | GO:0005225 | volume-sensitive anion channel activity(GO:0005225) |
0.1 | 1.2 | GO:0030159 | receptor signaling complex scaffold activity(GO:0030159) |
0.0 | 1.2 | GO:0001968 | fibronectin binding(GO:0001968) |
0.0 | 1.2 | GO:0070412 | R-SMAD binding(GO:0070412) |
0.0 | 1.1 | GO:0017160 | Ral GTPase binding(GO:0017160) |
0.0 | 1.1 | GO:0030676 | Rac guanyl-nucleotide exchange factor activity(GO:0030676) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.5 | PID CERAMIDE PATHWAY | Ceramide signaling pathway |
0.0 | 1.9 | PID ATM PATHWAY | ATM pathway |
0.0 | 1.6 | SIG PIP3 SIGNALING IN CARDIAC MYOCTES | Genes related to PIP3 signaling in cardiac myocytes |
0.1 | 1.4 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 1.3 | PID CD40 PATHWAY | CD40/CD40L signaling |
0.0 | 1.1 | PID AVB3 OPN PATHWAY | Osteopontin-mediated events |
0.0 | 1.1 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.0 | 0.9 | PID FAK PATHWAY | Signaling events mediated by focal adhesion kinase |
0.0 | 0.8 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 0.7 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.2 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.1 | 1.9 | REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS | Genes involved in Homologous recombination repair of replication-independent double-strand breaks |
0.0 | 1.6 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
0.0 | 1.5 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.0 | 1.4 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.0 | 1.3 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.1 | 1.1 | REACTOME ACTIVATION OF IRF3 IRF7 MEDIATED BY TBK1 IKK EPSILON | Genes involved in Activation of IRF3/IRF7 mediated by TBK1/IKK epsilon |
0.0 | 1.0 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.0 | 0.8 | REACTOME SIGNALING BY SCF KIT | Genes involved in Signaling by SCF-KIT |
0.0 | 0.7 | REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES | Genes involved in Synthesis and interconversion of nucleotide di- and triphosphates |