avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Foxc2 | mm10_v2_chr8_+_121116163_121116177 | 0.08 | 6.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_-_113258837 Show fit | 16.18 |
ENSMUST00000098673.3
|
amylase 2a5 |
|
chr3_-_20275659 Show fit | 16.07 |
ENSMUST00000011607.5
|
carboxypeptidase B1 (tissue) |
|
chr6_+_30541582 Show fit | 15.55 |
ENSMUST00000096066.4
|
carboxypeptidase A2, pancreatic |
|
chr3_-_113532288 Show fit | 12.90 |
ENSMUST00000132353.1
|
amylase 2a1 |
|
chr17_-_31144271 Show fit | 8.05 |
ENSMUST00000024826.7
|
trefoil factor 2 (spasmolytic protein 1) |
|
chr2_-_62483637 Show fit | 5.30 |
ENSMUST00000136686.1
ENSMUST00000102733.3 |
glucagon |
|
chr6_+_142298419 Show fit | 5.12 |
ENSMUST00000041993.2
|
islet amyloid polypeptide |
|
chr6_-_136922169 Show fit | 4.58 |
ENSMUST00000032343.6
|
endoplasmic reticulum protein 27 |
|
chr3_+_107230608 Show fit | 3.53 |
ENSMUST00000179399.1
|
RIKEN cDNA A630076J17 gene |
|
chr5_-_108795352 Show fit | 3.15 |
ENSMUST00000004943.1
|
transmembrane emp24 protein transport domain containing |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 25.5 | GO:0006508 | proteolysis(GO:0006508) |
1.1 | 8.0 | GO:0060455 | negative regulation of gastric acid secretion(GO:0060455) |
0.8 | 5.3 | GO:0035948 | positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter(GO:0035948) |
0.6 | 5.1 | GO:0097647 | calcitonin family receptor signaling pathway(GO:0097646) amylin receptor signaling pathway(GO:0097647) |
0.0 | 5.1 | GO:0009166 | nucleotide catabolic process(GO:0009166) |
0.0 | 3.3 | GO:0050731 | positive regulation of peptidyl-tyrosine phosphorylation(GO:0050731) |
0.7 | 2.9 | GO:0010248 | establishment or maintenance of transmembrane electrochemical gradient(GO:0010248) |
0.4 | 2.9 | GO:0033564 | anterior/posterior axon guidance(GO:0033564) |
0.2 | 1.9 | GO:0060741 | prostate gland stromal morphogenesis(GO:0060741) |
0.4 | 1.8 | GO:0051919 | positive regulation of fibrinolysis(GO:0051919) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 71.7 | GO:0005615 | extracellular space(GO:0005615) |
0.6 | 4.8 | GO:0045098 | type III intermediate filament(GO:0045098) |
0.1 | 2.9 | GO:0005604 | basement membrane(GO:0005604) |
0.0 | 2.8 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.0 | 2.6 | GO:0005903 | brush border(GO:0005903) |
0.0 | 1.6 | GO:0005913 | cell-cell adherens junction(GO:0005913) |
0.0 | 1.5 | GO:0005581 | collagen trimer(GO:0005581) |
0.4 | 1.4 | GO:0044279 | other organism cell membrane(GO:0044218) other organism membrane(GO:0044279) |
0.2 | 1.4 | GO:0035867 | alphav-beta3 integrin-IGF-1-IGF1R complex(GO:0035867) insulin-like growth factor ternary complex(GO:0042567) |
0.1 | 1.0 | GO:0016012 | sarcoglycan complex(GO:0016012) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 30.3 | GO:0004181 | metallocarboxypeptidase activity(GO:0004181) |
2.3 | 16.2 | GO:0004556 | alpha-amylase activity(GO:0004556) |
0.1 | 11.4 | GO:0005179 | hormone activity(GO:0005179) |
0.6 | 8.0 | GO:0045236 | CXCR chemokine receptor binding(GO:0045236) |
0.0 | 5.5 | GO:0005178 | integrin binding(GO:0005178) |
1.0 | 4.8 | GO:0004850 | uridine phosphorylase activity(GO:0004850) |
1.0 | 2.9 | GO:0005333 | norepinephrine transmembrane transporter activity(GO:0005333) |
0.1 | 2.5 | GO:0004745 | retinol dehydrogenase activity(GO:0004745) |
0.1 | 1.8 | GO:0004190 | aspartic-type endopeptidase activity(GO:0004190) |
0.0 | 1.7 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.9 | PID RET PATHWAY | Signaling events regulated by Ret tyrosine kinase |
0.1 | 4.6 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.1 | 2.9 | PID NETRIN PATHWAY | Netrin-mediated signaling events |
0.0 | 2.6 | PID SYNDECAN 1 PATHWAY | Syndecan-1-mediated signaling events |
0.0 | 1.4 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.0 | 1.1 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 0.9 | PID IGF1 PATHWAY | IGF1 pathway |
0.0 | 0.7 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.0 | 0.7 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 0.5 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.2 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.1 | 5.0 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |
0.3 | 4.9 | REACTOME SYNTHESIS SECRETION AND DEACYLATION OF GHRELIN | Genes involved in Synthesis, Secretion, and Deacylation of Ghrelin |
0.3 | 4.8 | REACTOME PYRIMIDINE CATABOLISM | Genes involved in Pyrimidine catabolism |
0.2 | 2.9 | REACTOME ROLE OF SECOND MESSENGERS IN NETRIN1 SIGNALING | Genes involved in Role of second messengers in netrin-1 signaling |
0.2 | 2.9 | REACTOME ABACAVIR TRANSPORT AND METABOLISM | Genes involved in Abacavir transport and metabolism |
0.0 | 1.6 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 1.5 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.1 | 1.4 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.1 | 1.0 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |