avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Foxd1 | mm10_v2_chr13_+_98354234_98354250 | 0.20 | 2.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_-_138170992 Show fit | 6.42 |
ENSMUST00000139983.1
|
minichromosome maintenance deficient 7 (S. cerevisiae) |
|
chr11_-_102365111 Show fit | 6.11 |
ENSMUST00000006749.9
|
solute carrier family 4 (anion exchanger), member 1 |
|
chr8_+_70373541 Show fit | 6.05 |
ENSMUST00000003659.7
|
cartilage oligomeric matrix protein |
|
chr5_-_138171248 Show fit | 5.87 |
ENSMUST00000153867.1
|
minichromosome maintenance deficient 7 (S. cerevisiae) |
|
chr5_-_138171216 Show fit | 5.56 |
ENSMUST00000147920.1
|
minichromosome maintenance deficient 7 (S. cerevisiae) |
|
chr7_+_110772604 Show fit | 5.54 |
ENSMUST00000005829.6
|
adenosine monophosphate deaminase 3 |
|
chr15_+_80623499 Show fit | 5.39 |
ENSMUST00000043149.7
|
GRB2-related adaptor protein 2 |
|
chr11_+_74619594 Show fit | 5.26 |
ENSMUST00000100866.2
|
RIKEN cDNA E130309D14 gene |
|
chr8_-_85380964 Show fit | 5.11 |
ENSMUST00000122452.1
|
myosin light chain kinase 3 |
|
chr10_+_115817247 Show fit | 4.33 |
ENSMUST00000035563.7
ENSMUST00000080630.3 ENSMUST00000179196.1 |
tetraspanin 8 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 17.8 | GO:0006268 | DNA unwinding involved in DNA replication(GO:0006268) |
0.6 | 13.2 | GO:0030213 | hyaluronan biosynthetic process(GO:0030213) |
0.4 | 10.2 | GO:0014823 | response to activity(GO:0014823) |
0.5 | 8.5 | GO:0051988 | regulation of attachment of spindle microtubules to kinetochore(GO:0051988) |
0.8 | 5.8 | GO:0043553 | negative regulation of phosphatidylinositol 3-kinase activity(GO:0043553) |
0.2 | 5.6 | GO:0003417 | growth plate cartilage development(GO:0003417) |
0.6 | 5.5 | GO:0032264 | IMP salvage(GO:0032264) |
0.2 | 5.4 | GO:0006270 | DNA replication initiation(GO:0006270) |
0.9 | 5.1 | GO:0002528 | regulation of vascular permeability involved in acute inflammatory response(GO:0002528) |
0.1 | 4.9 | GO:0045604 | regulation of epidermal cell differentiation(GO:0045604) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 17.8 | GO:0042555 | MCM complex(GO:0042555) |
0.2 | 13.4 | GO:0000307 | cyclin-dependent protein kinase holoenzyme complex(GO:0000307) |
1.7 | 8.5 | GO:0097149 | centralspindlin complex(GO:0097149) |
0.1 | 6.3 | GO:0014704 | intercalated disc(GO:0014704) |
0.0 | 6.0 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
1.8 | 5.4 | GO:0097135 | cyclin E2-CDK2 complex(GO:0097135) |
0.0 | 4.9 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
1.0 | 4.1 | GO:1902737 | viral replication complex(GO:0019034) dendritic filopodium(GO:1902737) |
0.1 | 4.1 | GO:0031430 | M band(GO:0031430) |
0.0 | 4.1 | GO:0090575 | RNA polymerase II transcription factor complex(GO:0090575) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 17.8 | GO:0004003 | ATP-dependent DNA helicase activity(GO:0004003) |
0.3 | 13.4 | GO:0004693 | cyclin-dependent protein serine/threonine kinase activity(GO:0004693) |
0.1 | 11.7 | GO:0017048 | Rho GTPase binding(GO:0017048) |
0.9 | 6.1 | GO:0005499 | vitamin D binding(GO:0005499) |
0.3 | 6.1 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
1.4 | 5.8 | GO:0036313 | phosphatidylinositol 3-kinase catalytic subunit binding(GO:0036313) |
0.1 | 5.8 | GO:0070888 | E-box binding(GO:0070888) |
0.6 | 5.5 | GO:0047623 | AMP deaminase activity(GO:0003876) adenosine-phosphate deaminase activity(GO:0047623) |
0.2 | 5.4 | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538) |
0.1 | 5.4 | GO:0004715 | non-membrane spanning protein tyrosine kinase activity(GO:0004715) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 17.4 | PID ATR PATHWAY | ATR signaling pathway |
0.3 | 16.4 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
0.2 | 10.3 | PID PLK1 PATHWAY | PLK1 signaling events |
0.0 | 7.9 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.0 | 6.8 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.4 | 6.6 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
0.4 | 5.4 | SA REG CASCADE OF CYCLIN EXPR | Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. |
0.1 | 3.4 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.1 | 2.9 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 2.1 | NABA COLLAGENS | Genes encoding collagen proteins |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 17.8 | REACTOME UNWINDING OF DNA | Genes involved in Unwinding of DNA |
0.3 | 13.2 | REACTOME G1 PHASE | Genes involved in G1 Phase |
0.1 | 10.0 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.2 | 6.6 | REACTOME GENERATION OF SECOND MESSENGER MOLECULES | Genes involved in Generation of second messenger molecules |
0.3 | 5.5 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.3 | 5.2 | REACTOME G0 AND EARLY G1 | Genes involved in G0 and Early G1 |
0.1 | 4.9 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 4.5 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.0 | 4.4 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.0 | 4.4 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |