avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Foxd2 | mm10_v2_chr4_-_114908892_114908914 | 0.29 | 8.3e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_+_131032061 Show fit | 3.80 |
ENSMUST00000084509.3
|
deleted in malignant brain tumors 1 |
|
chr14_+_80000292 Show fit | 2.29 |
ENSMUST00000088735.3
|
olfactomedin 4 |
|
chr2_-_62483637 Show fit | 2.21 |
ENSMUST00000136686.1
ENSMUST00000102733.3 |
glucagon |
|
chr14_-_70630149 Show fit | 2.08 |
ENSMUST00000022694.9
|
dematin actin binding protein |
|
chr3_-_75270073 Show fit | 2.02 |
ENSMUST00000039047.4
|
serine (or cysteine) peptidase inhibitor, clade I, member 2 |
|
chr6_+_142298419 Show fit | 1.99 |
ENSMUST00000041993.2
|
islet amyloid polypeptide |
|
chr1_-_132367879 Show fit | 1.90 |
ENSMUST00000142609.1
|
transmembrane and coiled-coil domains 2 |
|
chr12_+_111971545 Show fit | 1.74 |
ENSMUST00000079009.5
|
tudor domain containing 9 |
|
chr2_-_160619971 Show fit | 1.72 |
ENSMUST00000109473.1
|
predicted gene 14221 |
|
chr13_-_19824234 Show fit | 1.49 |
ENSMUST00000065335.2
|
G protein-coupled receptor 141 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.8 | GO:0001833 | inner cell mass cell proliferation(GO:0001833) |
0.0 | 2.3 | GO:1900026 | positive regulation of substrate adhesion-dependent cell spreading(GO:1900026) |
0.3 | 2.2 | GO:0035948 | positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter(GO:0035948) |
0.7 | 2.1 | GO:0035585 | calcium-mediated signaling using extracellular calcium source(GO:0035585) |
0.2 | 2.0 | GO:0097646 | calcitonin family receptor signaling pathway(GO:0097646) amylin receptor signaling pathway(GO:0097647) |
0.0 | 1.9 | GO:0042982 | amyloid precursor protein metabolic process(GO:0042982) |
0.4 | 1.7 | GO:1901580 | post-embryonic appendage morphogenesis(GO:0035120) post-embryonic limb morphogenesis(GO:0035127) post-embryonic forelimb morphogenesis(GO:0035128) telomeric repeat-containing RNA transcription(GO:0097393) telomeric repeat-containing RNA transcription from RNA pol II promoter(GO:0097394) regulation of telomeric RNA transcription from RNA pol II promoter(GO:1901580) negative regulation of telomeric RNA transcription from RNA pol II promoter(GO:1901581) positive regulation of telomeric RNA transcription from RNA pol II promoter(GO:1901582) |
0.3 | 1.7 | GO:2000660 | negative regulation of interleukin-1-mediated signaling pathway(GO:2000660) |
0.1 | 1.7 | GO:0034587 | piRNA metabolic process(GO:0034587) |
0.1 | 1.3 | GO:0006968 | cellular defense response(GO:0006968) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 3.8 | GO:0030670 | phagocytic vesicle membrane(GO:0030670) |
0.2 | 2.3 | GO:0042581 | specific granule(GO:0042581) |
0.5 | 2.1 | GO:0031095 | platelet dense tubular network membrane(GO:0031095) |
0.4 | 1.7 | GO:1990707 | subtelomeric heterochromatin(GO:1990421) nuclear subtelomeric heterochromatin(GO:1990707) |
0.3 | 1.7 | GO:0071547 | piP-body(GO:0071547) |
0.0 | 1.1 | GO:0005859 | muscle myosin complex(GO:0005859) |
0.0 | 0.9 | GO:0043034 | costamere(GO:0043034) |
0.0 | 0.8 | GO:0031528 | guanylate cyclase complex, soluble(GO:0008074) microvillus membrane(GO:0031528) |
0.0 | 0.5 | GO:0097470 | ribbon synapse(GO:0097470) |
0.0 | 0.5 | GO:0071339 | MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.2 | GO:0005179 | hormone activity(GO:0005179) |
0.1 | 3.8 | GO:0005044 | scavenger receptor activity(GO:0005044) |
0.0 | 2.9 | GO:0043621 | protein self-association(GO:0043621) |
0.0 | 1.8 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.6 | 1.7 | GO:0045352 | interleukin-1, Type II receptor binding(GO:0005151) interleukin-1 Type I receptor antagonist activity(GO:0045352) interleukin-1 Type II receptor antagonist activity(GO:0045353) |
0.2 | 1.7 | GO:0015616 | DNA translocase activity(GO:0015616) |
0.0 | 1.7 | GO:0004004 | RNA helicase activity(GO:0003724) ATP-dependent RNA helicase activity(GO:0004004) |
0.1 | 1.1 | GO:0097493 | structural molecule activity conferring elasticity(GO:0097493) |
0.2 | 0.9 | GO:0004692 | cGMP-dependent protein kinase activity(GO:0004692) |
0.1 | 0.9 | GO:0008241 | peptidyl-dipeptidase activity(GO:0008241) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.3 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 2.1 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 1.7 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.0 | 1.3 | ST B CELL ANTIGEN RECEPTOR | B Cell Antigen Receptor |
0.0 | 1.0 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 0.9 | PID P38 ALPHA BETA PATHWAY | Regulation of p38-alpha and p38-beta |
0.0 | 0.8 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
0.0 | 0.8 | PID ERBB1 INTERNALIZATION PATHWAY | Internalization of ErbB1 |
0.0 | 0.3 | PID NFKAPPAB CANONICAL PATHWAY | Canonical NF-kappaB pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.2 | REACTOME SYNTHESIS SECRETION AND DEACYLATION OF GHRELIN | Genes involved in Synthesis, Secretion, and Deacylation of Ghrelin |
0.1 | 2.0 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |
0.0 | 2.0 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.0 | 1.6 | REACTOME IL1 SIGNALING | Genes involved in Interleukin-1 signaling |
0.0 | 1.1 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 0.9 | REACTOME N GLYCAN ANTENNAE ELONGATION | Genes involved in N-Glycan antennae elongation |
0.0 | 0.9 | REACTOME RAP1 SIGNALLING | Genes involved in Rap1 signalling |
0.1 | 0.8 | REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY | Genes involved in Adenylate cyclase activating pathway |
0.0 | 0.7 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.0 | 0.3 | REACTOME NOD1 2 SIGNALING PATHWAY | Genes involved in NOD1/2 Signaling Pathway |