avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Foxf2 | mm10_v2_chr13_+_31625802_31625816 | 0.39 | 1.8e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_-_106167564 Show fit | 11.06 |
ENSMUST00000063062.8
|
chitinase 3-like 3 |
|
chr8_+_70373541 Show fit | 8.39 |
ENSMUST00000003659.7
|
cartilage oligomeric matrix protein |
|
chr8_-_85380964 Show fit | 8.38 |
ENSMUST00000122452.1
|
myosin light chain kinase 3 |
|
chr4_-_87806296 Show fit | 7.48 |
ENSMUST00000126353.1
ENSMUST00000149357.1 |
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 |
|
chr4_-_87806276 Show fit | 5.67 |
ENSMUST00000148059.1
|
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 |
|
chr2_-_84822546 Show fit | 5.50 |
ENSMUST00000028471.5
|
smoothelin-like 1 |
|
chr10_+_88091070 Show fit | 5.22 |
ENSMUST00000048621.7
|
pro-melanin-concentrating hormone |
|
chr13_-_23465872 Show fit | 5.22 |
ENSMUST00000041674.7
|
butyrophilin, subfamily 1, member A1 |
|
chr10_+_115817247 Show fit | 5.18 |
ENSMUST00000035563.7
ENSMUST00000080630.3 ENSMUST00000179196.1 |
tetraspanin 8 |
|
chr15_+_79348061 Show fit | 4.41 |
ENSMUST00000163691.1
|
v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 13.2 | GO:2000096 | positive regulation of Wnt signaling pathway, planar cell polarity pathway(GO:2000096) |
0.5 | 11.8 | GO:0030213 | hyaluronan biosynthetic process(GO:0030213) |
0.4 | 9.2 | GO:0003417 | growth plate cartilage development(GO:0003417) |
0.6 | 8.8 | GO:0046007 | negative regulation of activated T cell proliferation(GO:0046007) |
1.4 | 8.4 | GO:0002528 | regulation of vascular permeability involved in acute inflammatory response(GO:0002528) |
0.1 | 8.4 | GO:0045604 | regulation of epidermal cell differentiation(GO:0045604) |
0.4 | 8.2 | GO:0001580 | detection of chemical stimulus involved in sensory perception of bitter taste(GO:0001580) |
0.1 | 6.7 | GO:0007030 | Golgi organization(GO:0007030) |
0.2 | 5.5 | GO:0014823 | response to activity(GO:0014823) |
1.7 | 5.2 | GO:0046005 | positive regulation of circadian sleep/wake cycle, REM sleep(GO:0046005) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 13.2 | GO:0008023 | transcription elongation factor complex(GO:0008023) |
0.3 | 11.8 | GO:0000307 | cyclin-dependent protein kinase holoenzyme complex(GO:0000307) |
1.6 | 8.2 | GO:0031680 | G-protein beta/gamma-subunit complex(GO:0031680) |
0.2 | 7.6 | GO:0055038 | recycling endosome membrane(GO:0055038) |
0.1 | 5.5 | GO:0031430 | M band(GO:0031430) |
0.0 | 3.7 | GO:0014069 | postsynaptic density(GO:0014069) |
0.0 | 3.4 | GO:0044798 | nuclear transcription factor complex(GO:0044798) |
0.1 | 2.3 | GO:0001741 | XY body(GO:0001741) |
0.1 | 2.3 | GO:0016592 | mediator complex(GO:0016592) |
0.0 | 2.3 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 12.5 | GO:0004693 | cyclin-dependent protein serine/threonine kinase activity(GO:0004693) |
1.2 | 8.4 | GO:0005499 | vitamin D binding(GO:0005499) |
1.2 | 8.4 | GO:0004687 | myosin light chain kinase activity(GO:0004687) |
0.4 | 8.2 | GO:0031683 | G-protein beta/gamma-subunit complex binding(GO:0031683) |
0.2 | 6.7 | GO:0004012 | phospholipid-translocating ATPase activity(GO:0004012) |
0.3 | 5.5 | GO:0005523 | tropomyosin binding(GO:0005523) |
0.2 | 5.2 | GO:0071855 | neuropeptide receptor binding(GO:0071855) |
0.7 | 4.2 | GO:0097001 | ceramide binding(GO:0097001) |
0.1 | 3.4 | GO:0043015 | gamma-tubulin binding(GO:0043015) |
0.0 | 3.4 | GO:0004725 | protein tyrosine phosphatase activity(GO:0004725) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 11.8 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
0.0 | 8.4 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.4 | 8.2 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
0.0 | 3.4 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.2 | 3.3 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.1 | 2.3 | PID S1P S1P4 PATHWAY | S1P4 pathway |
0.0 | 1.7 | PID KIT PATHWAY | Signaling events mediated by Stem cell factor receptor (c-Kit) |
0.0 | 1.7 | PID PS1 PATHWAY | Presenilin action in Notch and Wnt signaling |
0.0 | 1.6 | PID ERBB1 RECEPTOR PROXIMAL PATHWAY | EGF receptor (ErbB1) signaling pathway |
0.0 | 1.6 | PID WNT NONCANONICAL PATHWAY | Noncanonical Wnt signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 13.0 | REACTOME G1 PHASE | Genes involved in G1 Phase |
0.9 | 10.0 | REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE | Genes involved in Regulation of Insulin Secretion by Acetylcholine |
0.1 | 8.4 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.1 | 6.7 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.0 | 4.6 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.1 | 3.9 | REACTOME CIRCADIAN CLOCK | Genes involved in Circadian Clock |
0.1 | 3.8 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.1 | 3.4 | REACTOME LYSOSOME VESICLE BIOGENESIS | Genes involved in Lysosome Vesicle Biogenesis |
0.2 | 2.3 | REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION | Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression |
0.1 | 2.3 | REACTOME INHIBITION OF INSULIN SECRETION BY ADRENALINE NORADRENALINE | Genes involved in Inhibition of Insulin Secretion by Adrenaline/Noradrenaline |