avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Foxg1 | mm10_v2_chr12_+_49383007_49383105 | 0.11 | 5.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_+_143005046 Show fit | 1.97 |
ENSMUST00000009396.6
|
tetraspanin 32 |
|
chr10_-_120476469 Show fit | 1.65 |
ENSMUST00000072777.7
ENSMUST00000159699.1 |
high mobility group AT-hook 2 |
|
chr3_-_106149761 Show fit | 1.52 |
ENSMUST00000149836.1
|
chitinase 3-like 3 |
|
chr15_+_79891631 Show fit | 1.49 |
ENSMUST00000177350.1
ENSMUST00000177483.1 |
apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 |
|
chr15_-_95528702 Show fit | 1.07 |
ENSMUST00000166170.1
|
NEL-like 2 |
|
chr15_-_95528228 Show fit | 0.90 |
ENSMUST00000075275.2
|
NEL-like 2 |
|
chr3_-_127225917 Show fit | 0.86 |
ENSMUST00000182064.1
ENSMUST00000182662.1 |
ankyrin 2, brain |
|
chr4_+_154960915 Show fit | 0.86 |
ENSMUST00000049621.6
|
hairy and enhancer of split 5 (Drosophila) |
|
chr13_-_71963713 Show fit | 0.83 |
ENSMUST00000077337.8
|
Iroquois related homeobox 1 (Drosophila) |
|
chr2_-_152830615 Show fit | 0.82 |
ENSMUST00000146380.1
ENSMUST00000134902.1 ENSMUST00000134357.1 ENSMUST00000109820.3 |
BCL2-like 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.0 | GO:0030886 | negative regulation of myeloid dendritic cell activation(GO:0030886) |
0.1 | 2.0 | GO:0046543 | development of secondary female sexual characteristics(GO:0046543) |
0.4 | 1.6 | GO:0046898 | response to cycloheximide(GO:0046898) |
0.2 | 1.6 | GO:0060613 | fat pad development(GO:0060613) |
0.2 | 1.6 | GO:0036371 | protein localization to M-band(GO:0036309) protein localization to T-tubule(GO:0036371) |
0.4 | 1.5 | GO:0031509 | telomeric heterochromatin assembly(GO:0031509) negative regulation of chromosome condensation(GO:1902340) |
0.1 | 1.5 | GO:0010528 | regulation of transposition(GO:0010528) negative regulation of transposition(GO:0010529) |
0.1 | 1.3 | GO:0001675 | acrosome assembly(GO:0001675) |
0.3 | 0.9 | GO:2000978 | auditory receptor cell fate determination(GO:0042668) negative regulation of forebrain neuron differentiation(GO:2000978) |
0.2 | 0.8 | GO:0072272 | proximal/distal pattern formation involved in metanephric nephron development(GO:0072272) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 2.0 | GO:0070442 | integrin alphaIIb-beta3 complex(GO:0070442) |
0.0 | 2.0 | GO:0043204 | perikaryon(GO:0043204) |
0.1 | 1.6 | GO:0097136 | Bcl-2 family protein complex(GO:0097136) |
0.0 | 1.6 | GO:0031430 | M band(GO:0031430) |
0.2 | 1.5 | GO:0001740 | Barr body(GO:0001740) |
0.1 | 0.7 | GO:0000137 | Golgi cis cisterna(GO:0000137) |
0.2 | 0.6 | GO:0031533 | mRNA cap methyltransferase complex(GO:0031533) |
0.0 | 0.3 | GO:0005641 | nuclear envelope lumen(GO:0005641) |
0.0 | 0.1 | GO:0042567 | insulin-like growth factor ternary complex(GO:0042567) |
0.0 | 0.1 | GO:0090576 | RNA polymerase III transcription factor complex(GO:0090576) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.0 | GO:0005080 | protein kinase C binding(GO:0005080) |
0.2 | 1.6 | GO:0051434 | BH3 domain binding(GO:0051434) |
0.1 | 1.6 | GO:0003680 | AT DNA binding(GO:0003680) |
0.0 | 1.6 | GO:0030507 | spectrin binding(GO:0030507) |
0.4 | 1.5 | GO:0047844 | deoxycytidine deaminase activity(GO:0047844) |
0.0 | 1.5 | GO:0031492 | nucleosomal DNA binding(GO:0031492) |
0.2 | 0.6 | GO:0004482 | mRNA (guanine-N7-)-methyltransferase activity(GO:0004482) |
0.1 | 0.6 | GO:0031404 | chloride ion binding(GO:0031404) |
0.1 | 0.5 | GO:0038100 | nodal binding(GO:0038100) |
0.1 | 0.4 | GO:1902379 | chemoattractant activity involved in axon guidance(GO:1902379) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.6 | SA PROGRAMMED CELL DEATH | Programmed cell death, or apoptosis, eliminates damaged or unneeded cells. |
0.0 | 0.7 | ST TUMOR NECROSIS FACTOR PATHWAY | Tumor Necrosis Factor Pathway. |
0.0 | 0.4 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.6 | REACTOME INFLAMMASOMES | Genes involved in Inflammasomes |
0.0 | 1.5 | REACTOME RNA POL I PROMOTER OPENING | Genes involved in RNA Polymerase I Promoter Opening |
0.0 | 0.9 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.0 | 0.6 | REACTOME ORGANIC CATION ANION ZWITTERION TRANSPORT | Genes involved in Organic cation/anion/zwitterion transport |
0.0 | 0.6 | REACTOME ACYL CHAIN REMODELLING OF PG | Genes involved in Acyl chain remodelling of PG |
0.0 | 0.6 | REACTOME MRNA CAPPING | Genes involved in mRNA Capping |
0.0 | 0.5 | REACTOME SIGNALING BY NODAL | Genes involved in Signaling by NODAL |
0.0 | 0.4 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |