avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Foxo1 | mm10_v2_chr3_+_52268337_52268388 | -0.14 | 4.2e-01 | Click! |
Foxi1 | mm10_v2_chr11_-_34208085_34208092 | 0.03 | 8.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_102365111 Show fit | 5.94 |
ENSMUST00000006749.9
|
solute carrier family 4 (anion exchanger), member 1 |
|
chr5_-_138170992 Show fit | 4.85 |
ENSMUST00000139983.1
|
minichromosome maintenance deficient 7 (S. cerevisiae) |
|
chr12_+_109452833 Show fit | 4.62 |
ENSMUST00000056110.8
|
delta-like 1 homolog (Drosophila) |
|
chr7_+_110772604 Show fit | 4.39 |
ENSMUST00000005829.6
|
adenosine monophosphate deaminase 3 |
|
chr5_-_138171248 Show fit | 4.20 |
ENSMUST00000153867.1
|
minichromosome maintenance deficient 7 (S. cerevisiae) |
|
chr17_+_40811089 Show fit | 4.07 |
ENSMUST00000024721.7
|
Rhesus blood group-associated A glycoprotein |
|
chr5_-_138171216 Show fit | 3.90 |
ENSMUST00000147920.1
|
minichromosome maintenance deficient 7 (S. cerevisiae) |
|
chr8_-_85380964 Show fit | 3.77 |
ENSMUST00000122452.1
|
myosin light chain kinase 3 |
|
chr4_-_87806296 Show fit | 3.46 |
ENSMUST00000126353.1
ENSMUST00000149357.1 |
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 |
|
chr11_+_32276400 Show fit | 3.39 |
ENSMUST00000020531.2
|
hemoglobin X, alpha-like embryonic chain in Hba complex |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 13.7 | GO:0006268 | DNA unwinding involved in DNA replication(GO:0006268) |
0.4 | 9.3 | GO:0030213 | hyaluronan biosynthetic process(GO:0030213) |
0.9 | 7.7 | GO:0032264 | IMP salvage(GO:0032264) |
0.4 | 7.5 | GO:0051988 | regulation of attachment of spindle microtubules to kinetochore(GO:0051988) |
0.3 | 7.4 | GO:0014823 | response to activity(GO:0014823) |
0.2 | 6.7 | GO:0006270 | DNA replication initiation(GO:0006270) |
0.5 | 5.5 | GO:0002826 | negative regulation of T-helper 1 type immune response(GO:0002826) |
0.3 | 5.4 | GO:2000096 | positive regulation of Wnt signaling pathway, planar cell polarity pathway(GO:2000096) |
0.2 | 5.2 | GO:2000251 | positive regulation of actin cytoskeleton reorganization(GO:2000251) |
0.6 | 5.0 | GO:0015671 | oxygen transport(GO:0015671) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 14.7 | GO:0042555 | MCM complex(GO:0042555) |
0.2 | 10.4 | GO:0000307 | cyclin-dependent protein kinase holoenzyme complex(GO:0000307) |
0.0 | 7.1 | GO:0009897 | external side of plasma membrane(GO:0009897) |
1.4 | 7.0 | GO:0097149 | centralspindlin complex(GO:0097149) |
0.1 | 6.4 | GO:0005871 | kinesin complex(GO:0005871) |
0.7 | 6.0 | GO:0005833 | hemoglobin complex(GO:0005833) |
0.1 | 5.6 | GO:0014704 | intercalated disc(GO:0014704) |
0.1 | 5.0 | GO:0008023 | transcription elongation factor complex(GO:0008023) |
0.4 | 4.3 | GO:0071439 | clathrin complex(GO:0071439) |
0.0 | 3.6 | GO:0016607 | nuclear speck(GO:0016607) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 15.1 | GO:0004003 | ATP-dependent DNA helicase activity(GO:0004003) |
0.1 | 11.6 | GO:0017048 | Rho GTPase binding(GO:0017048) |
0.2 | 10.5 | GO:0097472 | cyclin-dependent protein kinase activity(GO:0097472) |
0.9 | 7.7 | GO:0047623 | AMP deaminase activity(GO:0003876) adenosine-phosphate deaminase activity(GO:0047623) |
2.0 | 6.1 | GO:0002113 | interleukin-33 binding(GO:0002113) |
0.3 | 6.0 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
0.2 | 5.0 | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538) |
0.1 | 4.7 | GO:0008574 | ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574) |
0.0 | 4.6 | GO:0017124 | SH3 domain binding(GO:0017124) |
0.6 | 4.5 | GO:0004687 | myosin light chain kinase activity(GO:0004687) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 15.0 | PID ATR PATHWAY | ATR signaling pathway |
0.2 | 11.8 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
0.1 | 7.3 | PID PLK1 PATHWAY | PLK1 signaling events |
0.1 | 6.7 | PID NOTCH PATHWAY | Notch signaling pathway |
0.2 | 6.4 | PID AURORA B PATHWAY | Aurora B signaling |
0.4 | 6.1 | SA REG CASCADE OF CYCLIN EXPR | Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. |
0.1 | 4.5 | PID IL8 CXCR1 PATHWAY | IL8- and CXCR1-mediated signaling events |
0.3 | 4.4 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
0.0 | 3.1 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 3.0 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 15.2 | REACTOME UNWINDING OF DNA | Genes involved in Unwinding of DNA |
0.1 | 13.5 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.2 | 9.4 | REACTOME G1 PHASE | Genes involved in G1 Phase |
0.1 | 9.1 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.4 | 7.7 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.1 | 7.2 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.2 | 6.2 | REACTOME G0 AND EARLY G1 | Genes involved in G0 and Early G1 |
0.0 | 6.1 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.0 | 5.3 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
0.2 | 4.7 | REACTOME KINESINS | Genes involved in Kinesins |