avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Foxj1 | mm10_v2_chr11_-_116335384_116335399 | 0.61 | 8.6e-05 | Click! |
Foxk1 | mm10_v2_chr5_+_142401484_142401532 | 0.55 | 4.7e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_-_106167564 Show fit | 11.74 |
ENSMUST00000063062.8
|
chitinase 3-like 3 |
|
chr13_-_4150628 Show fit | 7.09 |
ENSMUST00000110704.2
ENSMUST00000021635.7 |
aldo-keto reductase family 1, member C18 |
|
chrX_-_162964557 Show fit | 5.69 |
ENSMUST00000038769.2
|
S100 calcium binding protein G |
|
chr14_-_70630149 Show fit | 4.67 |
ENSMUST00000022694.9
|
dematin actin binding protein |
|
chr6_+_34412334 Show fit | 4.29 |
ENSMUST00000007449.8
|
aldo-keto reductase family 1, member B7 |
|
chr17_+_40811089 Show fit | 4.18 |
ENSMUST00000024721.7
|
Rhesus blood group-associated A glycoprotein |
|
chr1_+_131638485 Show fit | 4.01 |
ENSMUST00000112411.1
|
cathepsin E |
|
chr4_-_117178726 Show fit | 3.72 |
ENSMUST00000153953.1
ENSMUST00000106436.1 |
kinesin family member 2C |
|
chr3_-_113532288 Show fit | 3.56 |
ENSMUST00000132353.1
|
amylase 2a1 |
|
chr2_+_174450678 Show fit | 3.44 |
ENSMUST00000016399.5
|
tubulin, beta 1 class VI |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.4 | 7.1 | GO:0006714 | sesquiterpenoid metabolic process(GO:0006714) |
1.6 | 4.7 | GO:0035585 | calcium-mediated signaling using extracellular calcium source(GO:0035585) |
1.4 | 4.2 | GO:0072488 | ammonium transmembrane transport(GO:0072488) |
0.2 | 4.2 | GO:0019370 | leukotriene biosynthetic process(GO:0019370) |
0.0 | 4.2 | GO:0051225 | spindle assembly(GO:0051225) |
0.2 | 3.9 | GO:2000096 | positive regulation of Wnt signaling pathway, planar cell polarity pathway(GO:2000096) |
0.2 | 3.9 | GO:0016540 | protein autoprocessing(GO:0016540) |
0.7 | 3.7 | GO:0030951 | establishment or maintenance of microtubule cytoskeleton polarity(GO:0030951) |
0.2 | 3.1 | GO:0006968 | cellular defense response(GO:0006968) |
0.1 | 3.1 | GO:0051573 | negative regulation of histone H3-K9 methylation(GO:0051573) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.3 | GO:0005871 | kinesin complex(GO:0005871) |
0.0 | 5.4 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.0 | 5.0 | GO:0016324 | apical plasma membrane(GO:0016324) |
1.2 | 4.7 | GO:0031095 | platelet dense tubular network membrane(GO:0031095) |
0.1 | 3.9 | GO:0008023 | transcription elongation factor complex(GO:0008023) |
0.2 | 3.1 | GO:0042589 | zymogen granule membrane(GO:0042589) |
0.0 | 2.8 | GO:0001650 | fibrillar center(GO:0001650) |
0.0 | 2.5 | GO:0032993 | protein-DNA complex(GO:0032993) |
0.0 | 2.5 | GO:0098857 | membrane raft(GO:0045121) membrane microdomain(GO:0098857) |
0.2 | 2.2 | GO:0000940 | condensed chromosome outer kinetochore(GO:0000940) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.4 | 7.1 | GO:0047787 | delta4-3-oxosteroid 5beta-reductase activity(GO:0047787) |
0.1 | 7.1 | GO:0043621 | protein self-association(GO:0043621) |
0.8 | 5.7 | GO:0005499 | vitamin D binding(GO:0005499) |
0.2 | 5.2 | GO:0004190 | aspartic-type endopeptidase activity(GO:0004190) |
0.1 | 4.9 | GO:0050699 | WW domain binding(GO:0050699) |
0.0 | 4.9 | GO:0070035 | ATP-dependent helicase activity(GO:0008026) purine NTP-dependent helicase activity(GO:0070035) |
0.0 | 4.5 | GO:0005096 | GTPase activator activity(GO:0005096) |
1.1 | 4.2 | GO:0004464 | leukotriene-C4 synthase activity(GO:0004464) |
0.2 | 4.2 | GO:0022840 | leak channel activity(GO:0022840) narrow pore channel activity(GO:0022842) |
0.5 | 3.8 | GO:0004032 | alditol:NADP+ 1-oxidoreductase activity(GO:0004032) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.5 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.0 | 5.1 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 4.9 | PID AURORA B PATHWAY | Aurora B signaling |
0.0 | 4.3 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.0 | 3.8 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 3.3 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
0.0 | 3.3 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 2.9 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.1 | 2.5 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
0.1 | 2.4 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.2 | REACTOME KINESINS | Genes involved in Kinesins |
0.0 | 4.8 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
0.1 | 4.7 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.1 | 4.2 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.0 | 3.7 | REACTOME CELL SURFACE INTERACTIONS AT THE VASCULAR WALL | Genes involved in Cell surface interactions at the vascular wall |
0.1 | 3.5 | REACTOME AMINE COMPOUND SLC TRANSPORTERS | Genes involved in Amine compound SLC transporters |
0.2 | 3.4 | REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY | Genes involved in Post-chaperonin tubulin folding pathway |
0.1 | 3.4 | REACTOME DEPOSITION OF NEW CENPA CONTAINING NUCLEOSOMES AT THE CENTROMERE | Genes involved in Deposition of New CENPA-containing Nucleosomes at the Centromere |
0.2 | 2.7 | REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE | Genes involved in Regulation of Insulin Secretion by Acetylcholine |
0.0 | 2.7 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |