avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Foxq1 | mm10_v2_chr13_+_31558157_31558176 | 0.06 | 7.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chrX_+_139563316 Show fit | 1.39 |
ENSMUST00000113027.1
|
ring finger protein 128 |
|
chr8_+_45658731 Show fit | 1.36 |
ENSMUST00000143820.1
ENSMUST00000132139.1 |
sorbin and SH3 domain containing 2 |
|
chr18_+_51117754 Show fit | 1.33 |
ENSMUST00000116639.2
|
proline rich 16 |
|
chr5_+_146079254 Show fit | 1.24 |
ENSMUST00000035571.8
|
cytochrome P450, family 3, subfamily a, polypeptide 59 |
|
chr8_+_45658666 Show fit | 1.22 |
ENSMUST00000134675.1
ENSMUST00000139869.1 ENSMUST00000126067.1 |
sorbin and SH3 domain containing 2 |
|
chr1_-_139560158 Show fit | 1.18 |
ENSMUST00000160423.1
ENSMUST00000023965.5 |
complement factor H-related 1 |
|
chr2_-_77519565 Show fit | 1.16 |
ENSMUST00000111830.2
|
zinc finger protein 385B |
|
chr5_-_145805862 Show fit | 1.15 |
ENSMUST00000067479.5
|
cytochrome P450, family 3, subfamily a, polypeptide 44 |
|
chr6_-_98342728 Show fit | 1.12 |
ENSMUST00000164491.1
|
predicted gene 765 |
|
chr13_-_22219820 Show fit | 1.11 |
ENSMUST00000057516.1
|
vomeronasal 1 receptor 193 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.6 | GO:0061049 | physiological muscle hypertrophy(GO:0003298) physiological cardiac muscle hypertrophy(GO:0003301) cell growth involved in cardiac muscle cell development(GO:0061049) |
0.1 | 2.0 | GO:0001865 | NK T cell differentiation(GO:0001865) |
0.0 | 1.4 | GO:0042036 | negative regulation of cytokine biosynthetic process(GO:0042036) |
0.1 | 1.3 | GO:0045793 | positive regulation of cell size(GO:0045793) |
0.1 | 1.2 | GO:0045919 | positive regulation of cytolysis(GO:0045919) |
0.1 | 1.1 | GO:0097501 | stress response to metal ion(GO:0097501) |
0.0 | 1.1 | GO:0007157 | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0007157) |
0.1 | 1.0 | GO:0035021 | negative regulation of Rac protein signal transduction(GO:0035021) |
0.0 | 1.0 | GO:0051044 | positive regulation of membrane protein ectodomain proteolysis(GO:0051044) |
0.0 | 1.0 | GO:0019236 | response to pheromone(GO:0019236) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.5 | GO:0005770 | late endosome(GO:0005770) |
0.0 | 1.3 | GO:0005581 | collagen trimer(GO:0005581) |
0.1 | 0.7 | GO:0031983 | vesicle lumen(GO:0031983) |
0.0 | 0.7 | GO:0098644 | complex of collagen trimers(GO:0098644) |
0.0 | 0.6 | GO:1990635 | proximal dendrite(GO:1990635) |
0.0 | 0.6 | GO:0016327 | apicolateral plasma membrane(GO:0016327) |
0.0 | 0.5 | GO:0097542 | ciliary tip(GO:0097542) |
0.0 | 0.5 | GO:0032580 | Golgi cisterna membrane(GO:0032580) |
0.0 | 0.5 | GO:0016580 | Sin3 complex(GO:0016580) |
0.1 | 0.4 | GO:0097381 | photoreceptor disc membrane(GO:0097381) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 4.6 | GO:0050649 | testosterone 6-beta-hydroxylase activity(GO:0050649) |
0.1 | 2.0 | GO:0005385 | zinc ion transmembrane transporter activity(GO:0005385) |
0.0 | 2.0 | GO:0004715 | non-membrane spanning protein tyrosine kinase activity(GO:0004715) |
0.1 | 1.0 | GO:0019855 | calcium channel inhibitor activity(GO:0019855) |
0.0 | 1.0 | GO:0016503 | pheromone receptor activity(GO:0016503) |
0.0 | 0.9 | GO:0005537 | mannose binding(GO:0005537) |
0.0 | 0.8 | GO:0034236 | protein kinase A catalytic subunit binding(GO:0034236) |
0.1 | 0.7 | GO:0038051 | glucocorticoid receptor activity(GO:0004883) transcription factor activity, ligand-activated RNA polymerase II transcription factor binding(GO:0038049) glucocorticoid-activated RNA polymerase II transcription factor binding transcription factor activity(GO:0038051) |
0.2 | 0.6 | GO:0005333 | norepinephrine transmembrane transporter activity(GO:0005333) |
0.0 | 0.6 | GO:0005070 | SH3/SH2 adaptor activity(GO:0005070) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.3 | ST T CELL SIGNAL TRANSDUCTION | T Cell Signal Transduction |
0.0 | 1.7 | PID REG GR PATHWAY | Glucocorticoid receptor regulatory network |
0.0 | 1.6 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 1.1 | PID NOTCH PATHWAY | Notch signaling pathway |
0.0 | 0.8 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 0.5 | PID IL6 7 PATHWAY | IL6-mediated signaling events |
0.0 | 0.4 | PID PDGFRA PATHWAY | PDGFR-alpha signaling pathway |
0.0 | 0.4 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 0.4 | PID CD40 PATHWAY | CD40/CD40L signaling |
0.0 | 0.3 | PID SMAD2 3PATHWAY | Regulation of cytoplasmic and nuclear SMAD2/3 signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.3 | REACTOME GENERATION OF SECOND MESSENGER MOLECULES | Genes involved in Generation of second messenger molecules |
0.1 | 2.0 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
0.0 | 1.2 | REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION | Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression |
0.1 | 0.8 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 0.6 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
0.0 | 0.6 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.1 | 0.5 | REACTOME CREATION OF C4 AND C2 ACTIVATORS | Genes involved in Creation of C4 and C2 activators |
0.0 | 0.5 | REACTOME METAL ION SLC TRANSPORTERS | Genes involved in Metal ion SLC transporters |
0.0 | 0.5 | REACTOME N GLYCAN ANTENNAE ELONGATION IN THE MEDIAL TRANS GOLGI | Genes involved in N-glycan antennae elongation in the medial/trans-Golgi |
0.0 | 0.5 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |