avrg: GSE58827: Dynamics of the Mouse Liver
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_+_82985473 Show fit | 2.04 |
ENSMUST00000040110.7
|
carbohydrate sulfotransferase 11 |
|
chr4_+_13743424 Show fit | 1.52 |
ENSMUST00000006761.3
|
runt-related transcription factor 1; translocated to, 1 (cyclin D-related) |
|
chr10_-_45470201 Show fit | 1.35 |
ENSMUST00000079390.6
|
lin-28 homolog B (C. elegans) |
|
chrX_-_142966709 Show fit | 1.33 |
ENSMUST00000041317.2
|
Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 |
|
chr14_-_70766598 Show fit | 1.33 |
ENSMUST00000167242.1
ENSMUST00000022696.6 |
exportin 7 |
|
chr19_-_45816007 Show fit | 1.26 |
ENSMUST00000079431.3
ENSMUST00000026247.6 ENSMUST00000162528.2 |
Kv channel-interacting protein 2 |
|
chr2_+_5951440 Show fit | 1.23 |
ENSMUST00000060092.6
|
UPF2 regulator of nonsense transcripts homolog (yeast) |
|
chr6_-_39206782 Show fit | 1.22 |
ENSMUST00000002305.8
|
jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae) |
|
chr9_-_61946768 Show fit | 1.15 |
ENSMUST00000034815.7
|
kinesin family member 23 |
|
chrX_+_159532674 Show fit | 1.13 |
ENSMUST00000057180.6
|
RIKEN cDNA A830080D01 gene |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.0 | GO:0030206 | chondroitin sulfate biosynthetic process(GO:0030206) |
0.0 | 1.5 | GO:0006611 | protein export from nucleus(GO:0006611) |
0.2 | 1.4 | GO:0010587 | miRNA catabolic process(GO:0010587) |
0.3 | 1.3 | GO:0045163 | clustering of voltage-gated potassium channels(GO:0045163) |
0.0 | 1.3 | GO:0006376 | mRNA splice site selection(GO:0006376) |
0.4 | 1.2 | GO:0044837 | assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) actomyosin contractile ring assembly(GO:0000915) actomyosin contractile ring organization(GO:0044837) |
0.0 | 1.2 | GO:0031100 | organ regeneration(GO:0031100) |
0.0 | 1.2 | GO:0045599 | negative regulation of fat cell differentiation(GO:0045599) |
0.4 | 1.1 | GO:0002277 | myeloid dendritic cell activation involved in immune response(GO:0002277) |
0.1 | 1.1 | GO:0019367 | fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.0 | GO:0016363 | nuclear matrix(GO:0016363) |
0.0 | 1.8 | GO:0005643 | nuclear pore(GO:0005643) |
0.0 | 1.6 | GO:0035145 | exon-exon junction complex(GO:0035145) |
0.0 | 1.6 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) |
0.0 | 1.5 | GO:0045335 | phagocytic vesicle(GO:0045335) |
0.2 | 1.2 | GO:0097149 | centralspindlin complex(GO:0097149) |
0.0 | 1.1 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
0.3 | 0.9 | GO:0034666 | integrin alpha2-beta1 complex(GO:0034666) |
0.1 | 0.9 | GO:0031415 | NatA complex(GO:0031415) |
0.1 | 0.7 | GO:0001739 | sex chromatin(GO:0001739) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 2.0 | GO:0047756 | chondroitin 4-sulfotransferase activity(GO:0047756) |
0.3 | 1.3 | GO:0005250 | A-type (transient outward) potassium channel activity(GO:0005250) |
0.1 | 1.3 | GO:0005049 | nuclear export signal receptor activity(GO:0005049) |
0.0 | 1.3 | GO:0003777 | microtubule motor activity(GO:0003777) |
0.0 | 1.2 | GO:0042162 | telomeric DNA binding(GO:0042162) |
0.1 | 1.1 | GO:0102338 | fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338) |
0.2 | 0.9 | GO:0098639 | collagen binding involved in cell-matrix adhesion(GO:0098639) |
0.1 | 0.9 | GO:0004596 | peptide alpha-N-acetyltransferase activity(GO:0004596) |
0.0 | 0.9 | GO:0043539 | protein serine/threonine kinase activator activity(GO:0043539) |
0.1 | 0.8 | GO:0001069 | regulatory region RNA binding(GO:0001069) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.8 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 1.2 | PID AURORA B PATHWAY | Aurora B signaling |
0.0 | 1.2 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.0 | 0.9 | PID INTEGRIN CS PATHWAY | Integrin family cell surface interactions |
0.0 | 0.8 | PID ATR PATHWAY | ATR signaling pathway |
0.0 | 0.8 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.0 | 0.7 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 0.6 | PID P38 ALPHA BETA PATHWAY | Regulation of p38-alpha and p38-beta |
0.0 | 0.6 | PID CXCR3 PATHWAY | CXCR3-mediated signaling events |
0.0 | 0.4 | SA REG CASCADE OF CYCLIN EXPR | Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.4 | REACTOME CHONDROITIN SULFATE BIOSYNTHESIS | Genes involved in Chondroitin sulfate biosynthesis |
0.0 | 1.3 | REACTOME KINESINS | Genes involved in Kinesins |
0.0 | 1.3 | REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX | Genes involved in Nonsense Mediated Decay Enhanced by the Exon Junction Complex |
0.0 | 1.1 | REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS | Genes involved in Synthesis of very long-chain fatty acyl-CoAs |
0.1 | 0.9 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.0 | 0.8 | REACTOME FGFR LIGAND BINDING AND ACTIVATION | Genes involved in FGFR ligand binding and activation |
0.1 | 0.7 | REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX | Genes involved in CDC6 association with the ORC:origin complex |
0.0 | 0.7 | REACTOME CRMPS IN SEMA3A SIGNALING | Genes involved in CRMPs in Sema3A signaling |
0.0 | 0.7 | REACTOME SIGNAL ATTENUATION | Genes involved in Signal attenuation |
0.0 | 0.7 | REACTOME REGULATORY RNA PATHWAYS | Genes involved in Regulatory RNA pathways |