avrg: GSE58827: Dynamics of the Mouse Liver
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_79301623 Show fit | 6.45 |
ENSMUST00000022595.7
|
regulator of cell cycle |
|
chr2_+_163054682 Show fit | 6.21 |
ENSMUST00000018005.3
|
myeloblastosis oncogene-like 2 |
|
chr10_+_79927039 Show fit | 6.01 |
ENSMUST00000019708.5
ENSMUST00000105377.1 |
AT rich interactive domain 3A (BRIGHT-like) |
|
chr10_-_45470201 Show fit | 5.41 |
ENSMUST00000079390.6
|
lin-28 homolog B (C. elegans) |
|
chr2_-_114052804 Show fit | 5.17 |
ENSMUST00000090269.6
|
actin, alpha, cardiac muscle 1 |
|
chr4_-_134018829 Show fit | 5.15 |
ENSMUST00000051674.2
|
lin-28 homolog A (C. elegans) |
|
chr11_-_12037391 Show fit | 4.79 |
ENSMUST00000093321.5
|
growth factor receptor bound protein 10 |
|
chr2_-_168767029 Show fit | 4.65 |
ENSMUST00000075044.3
|
sal-like 4 (Drosophila) |
|
chr9_-_108190352 Show fit | 4.14 |
ENSMUST00000035208.7
|
bassoon |
|
chr14_-_60086832 Show fit | 4.04 |
ENSMUST00000080368.5
|
ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 10.6 | GO:0010587 | miRNA catabolic process(GO:0010587) |
0.8 | 7.2 | GO:0003011 | involuntary skeletal muscle contraction(GO:0003011) |
2.2 | 6.5 | GO:0003330 | regulation of extracellular matrix constituent secretion(GO:0003330) positive regulation of extracellular matrix constituent secretion(GO:0003331) |
0.1 | 6.2 | GO:0090307 | mitotic spindle assembly(GO:0090307) |
0.5 | 5.2 | GO:0030240 | skeletal muscle thin filament assembly(GO:0030240) |
0.4 | 4.8 | GO:0045719 | negative regulation of glycogen biosynthetic process(GO:0045719) |
0.2 | 4.5 | GO:0001833 | inner cell mass cell proliferation(GO:0001833) |
0.1 | 4.3 | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome(GO:0000381) |
0.8 | 4.2 | GO:0035616 | histone H2B conserved C-terminal lysine deubiquitination(GO:0035616) |
1.4 | 4.1 | GO:0098928 | presynaptic signal transduction(GO:0098928) presynapse to nucleus signaling pathway(GO:0099526) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 14.7 | GO:0005730 | nucleolus(GO:0005730) |
0.1 | 7.9 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
0.0 | 7.5 | GO:0005884 | actin filament(GO:0005884) |
1.2 | 6.2 | GO:0031523 | Myb complex(GO:0031523) |
0.0 | 6.0 | GO:0045121 | membrane raft(GO:0045121) membrane microdomain(GO:0098857) |
0.5 | 5.4 | GO:0097197 | tetraspanin-enriched microdomain(GO:0097197) |
1.4 | 4.1 | GO:1990257 | piccolo-bassoon transport vesicle(GO:1990257) |
0.0 | 3.8 | GO:0016605 | PML body(GO:0016605) |
0.5 | 3.3 | GO:0005955 | calcineurin complex(GO:0005955) |
0.1 | 3.3 | GO:0005720 | nuclear heterochromatin(GO:0005720) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 8.3 | GO:0070412 | R-SMAD binding(GO:0070412) |
0.0 | 8.2 | GO:0017124 | SH3 domain binding(GO:0017124) |
0.1 | 7.2 | GO:0005070 | SH3/SH2 adaptor activity(GO:0005070) |
1.3 | 6.3 | GO:0051380 | norepinephrine binding(GO:0051380) |
0.6 | 6.2 | GO:0001135 | transcription factor activity, RNA polymerase II transcription factor recruiting(GO:0001135) |
0.5 | 5.9 | GO:0002151 | G-quadruplex RNA binding(GO:0002151) |
0.2 | 5.7 | GO:0004012 | phospholipid-translocating ATPase activity(GO:0004012) |
0.0 | 5.6 | GO:0004386 | helicase activity(GO:0004386) |
0.1 | 5.5 | GO:1990841 | promoter-specific chromatin binding(GO:1990841) |
0.0 | 5.3 | GO:0005525 | GTP binding(GO:0005525) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.3 | PID IGF1 PATHWAY | IGF1 pathway |
0.1 | 7.2 | PID E2F PATHWAY | E2F transcription factor network |
0.1 | 6.7 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.0 | 6.6 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 6.0 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.1 | 5.6 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.1 | 5.0 | PID HEDGEHOG GLI PATHWAY | Hedgehog signaling events mediated by Gli proteins |
0.1 | 4.4 | PID ARF6 PATHWAY | Arf6 signaling events |
0.1 | 3.3 | PID PLK1 PATHWAY | PLK1 signaling events |
0.1 | 3.2 | SIG IL4RECEPTOR IN B LYPHOCYTES | Genes related to IL4 rceptor signaling in B lymphocytes |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 10.2 | REACTOME AMINE LIGAND BINDING RECEPTORS | Genes involved in Amine ligand-binding receptors |
0.4 | 9.6 | REACTOME G0 AND EARLY G1 | Genes involved in G0 and Early G1 |
0.1 | 5.7 | REACTOME O LINKED GLYCOSYLATION OF MUCINS | Genes involved in O-linked glycosylation of mucins |
0.2 | 4.7 | REACTOME SIGNAL ATTENUATION | Genes involved in Signal attenuation |
0.0 | 4.7 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.1 | 4.5 | REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE | Genes involved in Synthesis of PIPs at the plasma membrane |
0.1 | 4.1 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.1 | 4.0 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.1 | 3.7 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.3 | 3.3 | REACTOME RECEPTOR LIGAND BINDING INITIATES THE SECOND PROTEOLYTIC CLEAVAGE OF NOTCH RECEPTOR | Genes involved in Receptor-ligand binding initiates the second proteolytic cleavage of Notch receptor |