avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Gata3 | mm10_v2_chr2_-_9878580_9878607 | -0.05 | 7.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_+_32276400 Show fit | 5.86 |
ENSMUST00000020531.2
|
hemoglobin X, alpha-like embryonic chain in Hba complex |
|
chr11_+_32276893 Show fit | 4.75 |
ENSMUST00000145569.1
|
hemoglobin X, alpha-like embryonic chain in Hba complex |
|
chr7_-_103843154 Show fit | 3.24 |
ENSMUST00000063957.4
|
hemoglobin Z, beta-like embryonic chain |
|
chr13_-_76056996 Show fit | 3.24 |
ENSMUST00000056130.4
|
G protein-coupled receptor 150 |
|
chr7_-_103853199 Show fit | 3.20 |
ENSMUST00000033229.3
|
hemoglobin Y, beta-like embryonic chain |
|
chr7_+_103937382 Show fit | 3.19 |
ENSMUST00000098189.1
|
olfactory receptor 632 |
|
chr13_+_23746734 Show fit | 2.52 |
ENSMUST00000099703.2
|
histone cluster 1, H2bb |
|
chr4_+_13751297 Show fit | 2.43 |
ENSMUST00000105566.2
|
runt-related transcription factor 1; translocated to, 1 (cyclin D-related) |
|
chrX_+_101449078 Show fit | 2.39 |
ENSMUST00000033674.5
|
integrin beta 1 binding protein 2 |
|
chr15_-_103251465 Show fit | 2.33 |
ENSMUST00000133600.1
ENSMUST00000134554.1 ENSMUST00000156927.1 ENSMUST00000149111.1 ENSMUST00000132836.1 |
nuclear factor, erythroid derived 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.0 | 16.2 | GO:0015671 | oxygen transport(GO:0015671) |
0.1 | 15.7 | GO:0007608 | sensory perception of smell(GO:0007608) |
0.1 | 6.8 | GO:0006334 | nucleosome assembly(GO:0006334) |
0.4 | 4.5 | GO:0034242 | negative regulation of syncytium formation by plasma membrane fusion(GO:0034242) |
0.0 | 4.2 | GO:0006342 | chromatin silencing(GO:0006342) |
0.4 | 3.9 | GO:2000741 | positive regulation of mesenchymal stem cell differentiation(GO:2000741) |
0.3 | 3.8 | GO:0031665 | negative regulation of lipopolysaccharide-mediated signaling pathway(GO:0031665) |
0.1 | 3.7 | GO:0045109 | intermediate filament organization(GO:0045109) |
0.9 | 3.4 | GO:0006780 | uroporphyrinogen III biosynthetic process(GO:0006780) |
0.1 | 2.9 | GO:0034723 | DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.3 | 18.3 | GO:0005833 | hemoglobin complex(GO:0005833) |
0.1 | 11.0 | GO:0000786 | nucleosome(GO:0000786) |
0.0 | 10.9 | GO:0005667 | transcription factor complex(GO:0005667) |
0.1 | 7.3 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.2 | 6.1 | GO:0045095 | keratin filament(GO:0045095) |
0.0 | 4.5 | GO:0032993 | protein-DNA complex(GO:0032993) |
0.1 | 3.4 | GO:0001533 | cornified envelope(GO:0001533) |
0.1 | 3.3 | GO:0022627 | cytosolic small ribosomal subunit(GO:0022627) |
0.0 | 3.1 | GO:0016529 | sarcoplasmic reticulum(GO:0016529) |
0.0 | 3.1 | GO:0043209 | myelin sheath(GO:0043209) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 19.7 | GO:0004984 | olfactory receptor activity(GO:0004984) |
2.0 | 16.2 | GO:0005344 | oxygen transporter activity(GO:0005344) |
0.0 | 8.3 | GO:0046982 | protein heterodimerization activity(GO:0046982) |
0.0 | 7.0 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.0 | 5.0 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.8 | 4.8 | GO:0004852 | uroporphyrinogen-III synthase activity(GO:0004852) |
0.0 | 4.4 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
0.4 | 3.6 | GO:0008379 | thioredoxin peroxidase activity(GO:0008379) |
0.1 | 3.6 | GO:0050699 | WW domain binding(GO:0050699) |
0.0 | 3.4 | GO:0003774 | motor activity(GO:0003774) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.0 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.1 | 2.7 | PID AURORA B PATHWAY | Aurora B signaling |
0.0 | 2.0 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.0 | 1.9 | PID IL8 CXCR2 PATHWAY | IL8- and CXCR2-mediated signaling events |
0.0 | 1.8 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.0 | 1.7 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
0.0 | 1.4 | PID RHOA PATHWAY | RhoA signaling pathway |
0.1 | 1.3 | SA REG CASCADE OF CYCLIN EXPR | Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. |
0.0 | 1.3 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 1.2 | PID IL3 PATHWAY | IL3-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.9 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.2 | 7.6 | REACTOME PACKAGING OF TELOMERE ENDS | Genes involved in Packaging Of Telomere Ends |
0.0 | 4.3 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.1 | 4.1 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.2 | 3.9 | REACTOME METABOLISM OF PORPHYRINS | Genes involved in Metabolism of porphyrins |
0.1 | 3.7 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.1 | 3.4 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |
0.1 | 3.0 | REACTOME KINESINS | Genes involved in Kinesins |
0.1 | 2.5 | REACTOME G0 AND EARLY G1 | Genes involved in G0 and Early G1 |
0.4 | 2.4 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |