avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Gata4 | mm10_v2_chr14_-_63271682_63271702 | 0.32 | 5.9e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr17_-_26199008 Show fit | 46.61 |
ENSMUST00000142410.1
ENSMUST00000120333.1 ENSMUST00000039113.7 |
protein disulfide isomerase associated 2 |
|
chr6_-_41314700 Show fit | 28.39 |
ENSMUST00000064324.5
|
trypsin 5 |
|
chr6_+_30639218 Show fit | 26.12 |
ENSMUST00000031806.9
|
carboxypeptidase A1, pancreatic |
|
chr2_+_84980458 Show fit | 23.24 |
ENSMUST00000028467.5
|
proteoglycan 2, bone marrow |
|
chr8_-_85380964 Show fit | 23.11 |
ENSMUST00000122452.1
|
myosin light chain kinase 3 |
|
chr19_+_58759700 Show fit | 21.97 |
ENSMUST00000026081.3
|
pancreatic lipase-related protein 2 |
|
chr6_+_41354105 Show fit | 21.40 |
ENSMUST00000072103.5
|
trypsin 10 |
|
chr4_-_137430517 Show fit | 21.09 |
ENSMUST00000102522.4
|
chymotrypsin-like elastase family, member 3B |
|
chr11_+_32276400 Show fit | 20.62 |
ENSMUST00000020531.2
|
hemoglobin X, alpha-like embryonic chain in Hba complex |
|
chr4_-_46404224 Show fit | 20.43 |
ENSMUST00000107764.2
|
hemogen |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 61.8 | GO:0006508 | proteolysis(GO:0006508) |
1.1 | 42.3 | GO:1902175 | regulation of oxidative stress-induced intrinsic apoptotic signaling pathway(GO:1902175) |
4.3 | 38.7 | GO:0002432 | granuloma formation(GO:0002432) |
4.8 | 38.6 | GO:0015671 | oxygen transport(GO:0015671) |
0.4 | 24.9 | GO:0001541 | ovarian follicle development(GO:0001541) |
7.7 | 23.2 | GO:0002215 | defense response to nematode(GO:0002215) |
3.9 | 23.1 | GO:0002528 | regulation of vascular permeability involved in acute inflammatory response(GO:0002528) |
1.3 | 22.0 | GO:0019374 | galactolipid metabolic process(GO:0019374) glycolipid catabolic process(GO:0019377) |
1.4 | 21.8 | GO:2000096 | positive regulation of Wnt signaling pathway, planar cell polarity pathway(GO:2000096) |
1.9 | 19.3 | GO:0090527 | actin filament reorganization(GO:0090527) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 156.8 | GO:0005615 | extracellular space(GO:0005615) |
0.0 | 45.3 | GO:0005576 | extracellular region(GO:0005576) |
3.6 | 39.8 | GO:0033093 | Weibel-Palade body(GO:0033093) |
4.8 | 38.6 | GO:0005833 | hemoglobin complex(GO:0005833) |
0.0 | 24.5 | GO:0005783 | endoplasmic reticulum(GO:0005783) |
1.5 | 22.0 | GO:0042589 | zymogen granule membrane(GO:0042589) |
0.4 | 20.3 | GO:0008023 | transcription elongation factor complex(GO:0008023) |
0.1 | 18.8 | GO:0042383 | sarcolemma(GO:0042383) |
0.1 | 16.1 | GO:0072562 | blood microparticle(GO:0072562) |
0.2 | 14.2 | GO:0030667 | secretory granule membrane(GO:0030667) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 94.7 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
1.8 | 58.0 | GO:0004181 | metallocarboxypeptidase activity(GO:0004181) |
4.2 | 46.6 | GO:0031545 | peptidyl-proline 4-dioxygenase activity(GO:0031545) |
0.2 | 40.2 | GO:0017137 | Rab GTPase binding(GO:0017137) |
4.8 | 38.6 | GO:0005344 | oxygen transporter activity(GO:0005344) |
5.0 | 24.9 | GO:0004105 | choline-phosphate cytidylyltransferase activity(GO:0004105) |
3.3 | 23.1 | GO:0004687 | myosin light chain kinase activity(GO:0004687) |
1.5 | 22.0 | GO:0047372 | acylglycerol lipase activity(GO:0047372) |
0.1 | 17.2 | GO:0030246 | carbohydrate binding(GO:0030246) |
0.3 | 17.1 | GO:0004521 | endoribonuclease activity(GO:0004521) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 47.7 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.1 | 33.3 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.5 | 22.6 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.2 | 16.3 | PID REG GR PATHWAY | Glucocorticoid receptor regulatory network |
0.3 | 11.0 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.4 | 10.7 | PID INTEGRIN CS PATHWAY | Integrin family cell surface interactions |
0.1 | 9.0 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.2 | 8.2 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.2 | 8.0 | PID ARF6 PATHWAY | Arf6 signaling events |
0.2 | 5.5 | PID NECTIN PATHWAY | Nectin adhesion pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 23.6 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
2.3 | 18.2 | REACTOME HORMONE LIGAND BINDING RECEPTORS | Genes involved in Hormone ligand-binding receptors |
0.8 | 16.1 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.8 | 15.2 | REACTOME P130CAS LINKAGE TO MAPK SIGNALING FOR INTEGRINS | Genes involved in p130Cas linkage to MAPK signaling for integrins |
0.7 | 14.5 | REACTOME ACYL CHAIN REMODELLING OF PS | Genes involved in Acyl chain remodelling of PS |
0.6 | 13.5 | REACTOME METABOLISM OF PORPHYRINS | Genes involved in Metabolism of porphyrins |
0.3 | 11.6 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.3 | 10.9 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
0.2 | 9.8 | REACTOME GLUCOSE TRANSPORT | Genes involved in Glucose transport |
0.2 | 8.6 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |