avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Gata5 | mm10_v2_chr2_-_180334665_180334704 | 0.89 | 4.0e-13 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_84980458 Show fit | 39.10 |
ENSMUST00000028467.5
|
proteoglycan 2, bone marrow |
|
chr2_+_84988194 Show fit | 37.18 |
ENSMUST00000028466.5
|
proteoglycan 3 |
|
chr11_-_83286722 Show fit | 33.73 |
ENSMUST00000163961.2
|
schlafen family member 14 |
|
chr17_+_40811089 Show fit | 32.04 |
ENSMUST00000024721.7
|
Rhesus blood group-associated A glycoprotein |
|
chr14_-_51057242 Show fit | 30.33 |
ENSMUST00000089798.2
|
ribonuclease, RNase A family, 12 (non-active) |
|
chr1_+_40429563 Show fit | 29.69 |
ENSMUST00000174335.1
|
interleukin 1 receptor-like 1 |
|
chr4_-_119189949 Show fit | 29.21 |
ENSMUST00000124626.1
|
erythroblast membrane-associated protein |
|
chr7_-_99238564 Show fit | 26.10 |
ENSMUST00000064231.7
|
monoacylglycerol O-acyltransferase 2 |
|
chr7_-_103853199 Show fit | 24.34 |
ENSMUST00000033229.3
|
hemoglobin Y, beta-like embryonic chain |
|
chr1_-_132367879 Show fit | 23.53 |
ENSMUST00000142609.1
|
transmembrane and coiled-coil domains 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
8.7 | 69.8 | GO:0015671 | oxygen transport(GO:0015671) |
13.0 | 39.1 | GO:0002215 | defense response to nematode(GO:0002215) |
9.3 | 37.2 | GO:0045575 | basophil activation(GO:0045575) |
0.3 | 36.1 | GO:0007586 | digestion(GO:0007586) |
1.9 | 33.7 | GO:0016075 | rRNA catabolic process(GO:0016075) |
10.7 | 32.0 | GO:0072488 | ammonium transmembrane transport(GO:0072488) |
0.2 | 31.7 | GO:0030177 | positive regulation of Wnt signaling pathway(GO:0030177) |
2.7 | 27.2 | GO:0002826 | negative regulation of T-helper 1 type immune response(GO:0002826) |
8.7 | 26.1 | GO:0046462 | monoacylglycerol metabolic process(GO:0046462) |
4.0 | 24.0 | GO:0019371 | cyclooxygenase pathway(GO:0019371) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
11.7 | 93.3 | GO:0005833 | hemoglobin complex(GO:0005833) |
0.0 | 46.0 | GO:0005615 | extracellular space(GO:0005615) |
0.0 | 34.3 | GO:0005783 | endoplasmic reticulum(GO:0005783) |
0.1 | 29.1 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.1 | 25.2 | GO:0008021 | synaptic vesicle(GO:0008021) |
0.0 | 23.0 | GO:0015629 | actin cytoskeleton(GO:0015629) |
0.7 | 17.2 | GO:0031362 | anchored component of external side of plasma membrane(GO:0031362) |
0.0 | 16.4 | GO:0005938 | cell cortex(GO:0005938) |
0.1 | 16.3 | GO:0072562 | blood microparticle(GO:0072562) |
1.2 | 15.5 | GO:0031254 | uropod(GO:0001931) cell trailing edge(GO:0031254) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 84.2 | GO:0030246 | carbohydrate binding(GO:0030246) |
0.3 | 70.4 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
7.6 | 45.5 | GO:0005344 | oxygen transporter activity(GO:0005344) |
9.4 | 37.7 | GO:0031721 | hemoglobin alpha binding(GO:0031721) |
0.5 | 32.2 | GO:0004521 | endoribonuclease activity(GO:0004521) |
1.7 | 32.0 | GO:0022842 | leak channel activity(GO:0022840) narrow pore channel activity(GO:0022842) |
0.5 | 30.3 | GO:0004540 | ribonuclease activity(GO:0004540) |
9.9 | 29.7 | GO:0002113 | interleukin-33 binding(GO:0002113) |
0.1 | 28.4 | GO:0005096 | GTPase activator activity(GO:0005096) |
5.2 | 26.1 | GO:0003846 | 2-acylglycerol O-acyltransferase activity(GO:0003846) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.7 | 76.3 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
1.1 | 36.2 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.3 | 26.2 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.1 | 24.8 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.9 | 24.0 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
0.6 | 14.4 | PID INTEGRIN CS PATHWAY | Integrin family cell surface interactions |
0.1 | 14.0 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 12.1 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.7 | 10.3 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
0.1 | 8.3 | PID FCER1 PATHWAY | Fc-epsilon receptor I signaling in mast cells |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 42.9 | REACTOME AMINE COMPOUND SLC TRANSPORTERS | Genes involved in Amine compound SLC transporters |
0.1 | 30.2 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.5 | 24.0 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
0.5 | 21.1 | REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D | Genes involved in Metabolism of steroid hormones and vitamins A and D |
0.4 | 20.9 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
1.4 | 20.6 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
1.4 | 15.6 | REACTOME DEFENSINS | Genes involved in Defensins |
0.7 | 14.6 | REACTOME NUCLEOTIDE LIKE PURINERGIC RECEPTORS | Genes involved in Nucleotide-like (purinergic) receptors |
0.8 | 13.5 | REACTOME P130CAS LINKAGE TO MAPK SIGNALING FOR INTEGRINS | Genes involved in p130Cas linkage to MAPK signaling for integrins |
0.3 | 10.3 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |