avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Gcm1 | mm10_v2_chr9_+_78051938_78051958 | -0.28 | 9.8e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_30373358 Show fit | 7.41 |
ENSMUST00000021004.7
|
syntrophin, gamma 2 |
|
chr15_+_10249560 Show fit | 6.29 |
ENSMUST00000134410.1
|
prolactin receptor |
|
chr13_-_4523322 Show fit | 5.74 |
ENSMUST00000080361.5
ENSMUST00000078239.3 |
aldo-keto reductase family 1, member C20 |
|
chr7_+_119900099 Show fit | 4.50 |
ENSMUST00000106516.1
|
LYR motif containing 1 |
|
chr3_+_138217814 Show fit | 4.34 |
ENSMUST00000090171.5
|
alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide |
|
chr8_-_45358737 Show fit | 3.85 |
ENSMUST00000155230.1
ENSMUST00000135912.1 |
family with sequence similarity 149, member A |
|
chr6_-_124636085 Show fit | 3.08 |
ENSMUST00000068797.2
|
predicted gene 5077 |
|
chr11_-_106613370 Show fit | 2.95 |
ENSMUST00000128933.1
|
testis expressed gene 2 |
|
chr17_-_32189457 Show fit | 2.90 |
ENSMUST00000087721.3
ENSMUST00000162117.1 |
epoxide hydrolase 3 |
|
chr8_-_3720640 Show fit | 2.65 |
ENSMUST00000062037.6
|
C-type lectin domain family 4, member g |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 6.3 | GO:0038161 | prolactin signaling pathway(GO:0038161) |
0.0 | 5.7 | GO:0006694 | steroid biosynthetic process(GO:0006694) |
1.1 | 4.3 | GO:0006069 | ethanol oxidation(GO:0006069) |
0.1 | 2.7 | GO:0002710 | negative regulation of T cell mediated immunity(GO:0002710) |
0.4 | 2.0 | GO:0015886 | heme transport(GO:0015886) |
0.2 | 2.0 | GO:0035356 | cellular triglyceride homeostasis(GO:0035356) |
0.5 | 1.9 | GO:0019287 | isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287) |
0.5 | 1.8 | GO:0002949 | tRNA threonylcarbamoyladenosine modification(GO:0002949) |
0.2 | 1.8 | GO:1900246 | positive regulation of RIG-I signaling pathway(GO:1900246) |
0.4 | 1.7 | GO:0015744 | succinate transport(GO:0015744) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.5 | GO:0030496 | midbody(GO:0030496) |
0.0 | 2.0 | GO:0005811 | lipid particle(GO:0005811) |
0.0 | 2.0 | GO:0072562 | blood microparticle(GO:0072562) |
0.4 | 1.8 | GO:0000408 | EKC/KEOPS complex(GO:0000408) |
0.0 | 1.8 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
0.1 | 1.4 | GO:0005579 | membrane attack complex(GO:0005579) |
0.1 | 1.3 | GO:0034045 | pre-autophagosomal structure membrane(GO:0034045) |
0.1 | 1.2 | GO:0017146 | NMDA selective glutamate receptor complex(GO:0017146) |
0.0 | 1.2 | GO:0032587 | ruffle membrane(GO:0032587) |
0.3 | 0.8 | GO:0042720 | mitochondrial inner membrane peptidase complex(GO:0042720) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 7.4 | GO:0097109 | neuroligin family protein binding(GO:0097109) |
1.3 | 6.3 | GO:0004925 | prolactin receptor activity(GO:0004925) |
0.2 | 5.7 | GO:0004033 | aldo-keto reductase (NADP) activity(GO:0004033) |
1.4 | 4.3 | GO:0004024 | alcohol dehydrogenase activity, zinc-dependent(GO:0004024) |
0.1 | 2.7 | GO:0001871 | pattern binding(GO:0001871) polysaccharide binding(GO:0030247) |
0.7 | 2.0 | GO:0050252 | retinol O-fatty-acyltransferase activity(GO:0050252) |
0.5 | 2.0 | GO:0015232 | heme transporter activity(GO:0015232) |
0.0 | 1.9 | GO:0016776 | phosphotransferase activity, phosphate group as acceptor(GO:0016776) |
0.6 | 1.8 | GO:0061711 | N(6)-L-threonylcarbamoyladenine synthase(GO:0061711) |
0.0 | 1.8 | GO:0003730 | mRNA 3'-UTR binding(GO:0003730) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.3 | PID ERBB4 PATHWAY | ErbB4 signaling events |
0.0 | 5.2 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 1.8 | SA PTEN PATHWAY | PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate. |
0.0 | 0.7 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.0 | 0.7 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 0.5 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.0 | 0.4 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 6.3 | REACTOME PROLACTIN RECEPTOR SIGNALING | Genes involved in Prolactin receptor signaling |
0.7 | 4.3 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |
0.0 | 2.0 | REACTOME TRIGLYCERIDE BIOSYNTHESIS | Genes involved in Triglyceride Biosynthesis |
0.1 | 1.9 | REACTOME CHOLESTEROL BIOSYNTHESIS | Genes involved in Cholesterol biosynthesis |
0.1 | 1.7 | REACTOME SULFUR AMINO ACID METABOLISM | Genes involved in Sulfur amino acid metabolism |
0.1 | 1.3 | REACTOME P2Y RECEPTORS | Genes involved in P2Y receptors |
0.1 | 1.2 | REACTOME SIGNAL REGULATORY PROTEIN SIRP FAMILY INTERACTIONS | Genes involved in Signal regulatory protein (SIRP) family interactions |
0.0 | 1.2 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
0.0 | 1.2 | REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION | Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression |
0.1 | 1.1 | REACTOME ACTIVATION OF IRF3 IRF7 MEDIATED BY TBK1 IKK EPSILON | Genes involved in Activation of IRF3/IRF7 mediated by TBK1/IKK epsilon |