avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Gmeb1 | mm10_v2_chr4_-_132261521_132261572 | 0.87 | 4.1e-12 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr8_+_23139064 Show fit | 9.58 |
ENSMUST00000033947.8
|
ankyrin 1, erythroid |
|
chr8_+_23139030 Show fit | 8.57 |
ENSMUST00000121075.1
|
ankyrin 1, erythroid |
|
chr6_+_113531675 Show fit | 8.29 |
ENSMUST00000036340.5
ENSMUST00000101051.2 |
Fanconi anemia, complementation group D2 |
|
chr3_+_127553462 Show fit | 6.25 |
ENSMUST00000043108.4
|
RIKEN cDNA 4930422G04 gene |
|
chr6_+_90619241 Show fit | 6.21 |
ENSMUST00000032177.8
|
solute carrier family 41, member 3 |
|
chr2_-_157007015 Show fit | 5.82 |
ENSMUST00000146413.1
|
DSN1, MIND kinetochore complex component, homolog (S. cerevisiae) |
|
chr15_+_99074968 Show fit | 5.13 |
ENSMUST00000039665.6
|
trophinin associated protein |
|
chr2_-_157007039 Show fit | 5.06 |
ENSMUST00000103129.2
ENSMUST00000103130.1 |
DSN1, MIND kinetochore complex component, homolog (S. cerevisiae) |
|
chr3_+_40800054 Show fit | 5.05 |
ENSMUST00000168287.1
|
polo-like kinase 4 |
|
chr1_+_175880775 Show fit | 5.03 |
ENSMUST00000039725.6
|
exonuclease 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 20.9 | GO:0006779 | porphyrin-containing compound biosynthetic process(GO:0006779) |
4.3 | 13.0 | GO:0006592 | ornithine biosynthetic process(GO:0006592) |
2.7 | 10.9 | GO:0051316 | attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) |
1.4 | 9.8 | GO:0046601 | positive regulation of centriole replication(GO:0046601) de novo centriole assembly(GO:0098535) |
0.8 | 8.3 | GO:2000348 | regulation of CD40 signaling pathway(GO:2000348) |
1.2 | 5.8 | GO:0097167 | circadian regulation of translation(GO:0097167) |
0.4 | 5.0 | GO:0016446 | somatic hypermutation of immunoglobulin genes(GO:0016446) |
0.6 | 4.4 | GO:0070294 | renal sodium ion absorption(GO:0070294) |
0.3 | 2.8 | GO:0000972 | transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000972) |
0.2 | 2.7 | GO:0031936 | negative regulation of chromatin silencing(GO:0031936) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 20.9 | GO:0014731 | spectrin-associated cytoskeleton(GO:0014731) |
0.0 | 11.6 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
2.7 | 10.9 | GO:0000818 | nuclear MIS12/MIND complex(GO:0000818) condensed chromosome inner kinetochore(GO:0000939) |
1.6 | 9.8 | GO:0098536 | deuterosome(GO:0098536) |
0.0 | 8.3 | GO:0000793 | condensed chromosome(GO:0000793) |
0.0 | 4.3 | GO:0016363 | nuclear matrix(GO:0016363) |
0.3 | 2.8 | GO:0031080 | nuclear pore outer ring(GO:0031080) |
0.1 | 2.6 | GO:0005680 | anaphase-promoting complex(GO:0005680) |
0.0 | 2.5 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.1 | 2.3 | GO:0044292 | dendrite terminus(GO:0044292) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.1 | 20.9 | GO:0008093 | cytoskeletal adaptor activity(GO:0008093) |
4.3 | 13.0 | GO:0017084 | glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350) delta1-pyrroline-5-carboxylate synthetase activity(GO:0017084) amino acid kinase activity(GO:0019202) |
0.0 | 8.9 | GO:0004674 | protein serine/threonine kinase activity(GO:0004674) |
0.2 | 7.5 | GO:0070182 | DNA polymerase binding(GO:0070182) |
1.3 | 5.0 | GO:0008309 | double-stranded DNA exodeoxyribonuclease activity(GO:0008309) |
0.1 | 3.2 | GO:0070888 | E-box binding(GO:0070888) |
0.1 | 2.8 | GO:0017056 | structural constituent of nuclear pore(GO:0017056) |
0.4 | 2.6 | GO:0010997 | anaphase-promoting complex binding(GO:0010997) |
0.2 | 2.5 | GO:1990226 | histone methyltransferase binding(GO:1990226) |
0.1 | 2.3 | GO:0005540 | hyaluronic acid binding(GO:0005540) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 8.3 | PID BARD1 PATHWAY | BARD1 signaling events |
0.3 | 5.8 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.1 | 2.3 | PID AURORA A PATHWAY | Aurora A signaling |
0.0 | 1.2 | PID P53 REGULATION PATHWAY | p53 pathway |
0.0 | 1.1 | PID DNA PK PATHWAY | DNA-PK pathway in nonhomologous end joining |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 20.9 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.5 | 13.0 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |
0.1 | 11.2 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.1 | 9.8 | REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES | Genes involved in Loss of Nlp from mitotic centrosomes |
0.7 | 8.3 | REACTOME REGULATION OF THE FANCONI ANEMIA PATHWAY | Genes involved in Regulation of the Fanconi anemia pathway |
0.1 | 5.8 | REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION | Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression |
0.0 | 3.3 | REACTOME MRNA SPLICING | Genes involved in mRNA Splicing |
0.2 | 2.3 | REACTOME HYALURONAN UPTAKE AND DEGRADATION | Genes involved in Hyaluronan uptake and degradation |
0.0 | 2.2 | REACTOME MRNA 3 END PROCESSING | Genes involved in mRNA 3'-end processing |
0.0 | 1.2 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |