avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Grhl1 | mm10_v2_chr12_+_24572276_24572308 | -0.07 | 6.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr9_-_78347140 Show fit | 10.25 |
ENSMUST00000034902.5
|
glutathione S-transferase, alpha 2 (Yc2) |
|
chr9_-_78347162 Show fit | 9.49 |
ENSMUST00000129247.1
|
glutathione S-transferase, alpha 2 (Yc2) |
|
chr9_+_78289923 Show fit | 8.30 |
ENSMUST00000119823.1
ENSMUST00000121273.1 |
predicted gene 10639 |
|
chr11_+_72435565 Show fit | 7.40 |
ENSMUST00000100903.2
|
gamma-glutamyltransferase 6 |
|
chr5_-_86518578 Show fit | 6.32 |
ENSMUST00000134179.1
|
transmembrane protease, serine 11g |
|
chr1_+_135818593 Show fit | 5.71 |
ENSMUST00000038760.8
|
ladinin |
|
chr8_-_93229517 Show fit | 5.62 |
ENSMUST00000176282.1
ENSMUST00000034173.7 |
carboxylesterase 1E |
|
chr18_+_56432116 Show fit | 5.62 |
ENSMUST00000070166.5
|
GRAM domain containing 3 |
|
chrX_-_38456407 Show fit | 5.55 |
ENSMUST00000074913.5
ENSMUST00000016678.7 ENSMUST00000061755.8 |
lysosomal-associated membrane protein 2 |
|
chr4_+_141242850 Show fit | 4.74 |
ENSMUST00000138096.1
ENSMUST00000006618.2 ENSMUST00000125392.1 |
Rho guanine nucleotide exchange factor (GEF) 19 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 23.2 | GO:0035634 | response to stilbenoid(GO:0035634) |
0.5 | 7.4 | GO:0006751 | glutathione catabolic process(GO:0006751) |
1.9 | 5.6 | GO:0071211 | protein targeting to vacuole involved in autophagy(GO:0071211) |
0.0 | 4.7 | GO:0035023 | regulation of Rho protein signal transduction(GO:0035023) |
0.2 | 3.7 | GO:0019363 | pyridine nucleotide biosynthetic process(GO:0019363) |
0.1 | 3.7 | GO:0044380 | protein localization to cytoskeleton(GO:0044380) |
0.4 | 3.2 | GO:0035360 | positive regulation of peroxisome proliferator activated receptor signaling pathway(GO:0035360) |
0.4 | 3.1 | GO:0042985 | negative regulation of amyloid precursor protein biosynthetic process(GO:0042985) |
0.7 | 2.7 | GO:2001287 | negative regulation of caveolin-mediated endocytosis(GO:2001287) |
0.1 | 2.2 | GO:1902236 | negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway(GO:1902236) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.7 | GO:0005604 | basement membrane(GO:0005604) |
1.9 | 5.6 | GO:0097636 | platelet dense granule membrane(GO:0031088) intrinsic component of autophagosome membrane(GO:0097636) integral component of autophagosome membrane(GO:0097637) |
0.1 | 5.6 | GO:0005881 | cytoplasmic microtubule(GO:0005881) |
0.1 | 3.7 | GO:0045095 | keratin filament(GO:0045095) |
0.0 | 3.5 | GO:0042579 | peroxisome(GO:0005777) microbody(GO:0042579) |
0.2 | 3.2 | GO:0046581 | intercellular canaliculus(GO:0046581) |
0.1 | 3.1 | GO:0030660 | Golgi-associated vesicle membrane(GO:0030660) |
0.7 | 2.7 | GO:0044393 | microspike(GO:0044393) |
0.0 | 2.2 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
0.0 | 1.9 | GO:0030496 | midbody(GO:0030496) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 19.7 | GO:1900750 | glutathione binding(GO:0043295) oligopeptide binding(GO:1900750) |
0.3 | 8.3 | GO:0004364 | glutathione transferase activity(GO:0004364) |
0.6 | 7.4 | GO:0036374 | glutathione hydrolase activity(GO:0036374) |
0.0 | 7.0 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.0 | 6.4 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
0.3 | 5.6 | GO:0016290 | palmitoyl-CoA hydrolase activity(GO:0016290) |
0.0 | 4.5 | GO:0045296 | cadherin binding(GO:0045296) |
0.7 | 3.7 | GO:1990254 | keratin filament binding(GO:1990254) |
0.9 | 3.5 | GO:0004452 | isopentenyl-diphosphate delta-isomerase activity(GO:0004452) |
0.0 | 3.1 | GO:0001540 | beta-amyloid binding(GO:0001540) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | PID NECTIN PATHWAY | Nectin adhesion pathway |
0.0 | 1.0 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.0 | 0.7 | PID ALPHA SYNUCLEIN PATHWAY | Alpha-synuclein signaling |
0.0 | 0.4 | SA CASPASE CASCADE | Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 19.7 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.4 | 7.4 | REACTOME TRYPTOPHAN CATABOLISM | Genes involved in Tryptophan catabolism |
0.1 | 5.6 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.1 | 3.5 | REACTOME CHOLESTEROL BIOSYNTHESIS | Genes involved in Cholesterol biosynthesis |
0.1 | 3.1 | REACTOME AMYLOIDS | Genes involved in Amyloids |
0.0 | 2.0 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.1 | 1.2 | REACTOME ACTIVATION OF IRF3 IRF7 MEDIATED BY TBK1 IKK EPSILON | Genes involved in Activation of IRF3/IRF7 mediated by TBK1/IKK epsilon |
0.0 | 1.2 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.0 | 0.8 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.0 | 0.7 | REACTOME KERATAN SULFATE BIOSYNTHESIS | Genes involved in Keratan sulfate biosynthesis |