avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Vax1 | mm10_v2_chr19_-_59170978_59170978 | -0.57 | 2.8e-04 | Click! |
Hoxd3 | mm10_v2_chr2_+_74711911_74711939 | -0.39 | 1.8e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_+_127898515 Show fit | 13.20 |
ENSMUST00000047134.7
|
4short chain dehydrogenase/reductase family 9C, member 7 |
|
chr1_+_130826762 Show fit | 9.21 |
ENSMUST00000133792.1
|
polymeric immunoglobulin receptor |
|
chr19_-_7966000 Show fit | 6.58 |
ENSMUST00000182102.1
ENSMUST00000075619.4 |
solute carrier family 22, member 27 |
|
chr7_-_48843663 Show fit | 4.80 |
ENSMUST00000167786.2
|
cysteine and glycine-rich protein 3 |
|
chr2_+_109917639 Show fit | 3.77 |
ENSMUST00000046548.7
ENSMUST00000111037.2 |
leucine-rich repeat-containing G protein-coupled receptor 4 |
|
chr2_+_116067213 Show fit | 3.72 |
ENSMUST00000152412.1
|
RIKEN cDNA G630016G05 gene |
|
chr18_+_56432116 Show fit | 3.24 |
ENSMUST00000070166.5
|
GRAM domain containing 3 |
|
chr1_+_88211956 Show fit | 2.91 |
ENSMUST00000073049.6
|
UDP glucuronosyltransferase 1 family, polypeptide A1 |
|
chr15_-_101892916 Show fit | 2.70 |
ENSMUST00000100179.1
|
keratin 76 |
|
chr10_+_63024315 Show fit | 2.67 |
ENSMUST00000124784.1
|
phenazine biosynthesis-like protein domain containing 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 14.0 | GO:0055114 | oxidation-reduction process(GO:0055114) |
2.3 | 9.2 | GO:0002415 | immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor(GO:0002415) |
0.6 | 8.4 | GO:0015747 | urate transport(GO:0015747) |
1.6 | 4.8 | GO:1903919 | regulation of actin filament severing(GO:1903918) negative regulation of actin filament severing(GO:1903919) |
1.3 | 3.8 | GO:0060995 | cell-cell signaling involved in kidney development(GO:0060995) Wnt signaling pathway involved in kidney development(GO:0061289) canonical Wnt signaling pathway involved in metanephric kidney development(GO:0061290) cell-cell signaling involved in metanephros development(GO:0072204) |
1.0 | 2.9 | GO:0018879 | biphenyl metabolic process(GO:0018879) |
0.0 | 2.9 | GO:0007601 | visual perception(GO:0007601) |
0.3 | 2.8 | GO:0019532 | oxalate transport(GO:0019532) |
0.7 | 2.7 | GO:0016062 | adaptation of rhodopsin mediated signaling(GO:0016062) light adaption(GO:0036367) |
0.2 | 2.7 | GO:0048733 | sebaceous gland development(GO:0048733) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 16.7 | GO:0005730 | nucleolus(GO:0005730) |
0.2 | 8.7 | GO:0055038 | recycling endosome membrane(GO:0055038) |
0.0 | 4.2 | GO:0030018 | Z disc(GO:0030018) |
0.1 | 3.9 | GO:0045095 | keratin filament(GO:0045095) |
0.0 | 3.4 | GO:0070469 | respiratory chain(GO:0070469) |
0.0 | 3.3 | GO:0005881 | cytoplasmic microtubule(GO:0005881) |
0.2 | 2.9 | GO:0034663 | endoplasmic reticulum chaperone complex(GO:0034663) |
0.0 | 2.4 | GO:0031526 | brush border membrane(GO:0031526) |
0.1 | 2.1 | GO:0000930 | gamma-tubulin complex(GO:0000930) |
0.2 | 1.6 | GO:0000275 | mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275) proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 13.2 | GO:0004745 | retinol dehydrogenase activity(GO:0004745) |
0.9 | 9.2 | GO:0019763 | immunoglobulin receptor activity(GO:0019763) |
0.6 | 8.4 | GO:1901702 | urate transmembrane transporter activity(GO:0015143) salt transmembrane transporter activity(GO:1901702) |
0.2 | 5.9 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
0.8 | 4.8 | GO:0061629 | RNA polymerase II sequence-specific DNA binding transcription factor binding(GO:0061629) |
0.0 | 4.6 | GO:0016853 | isomerase activity(GO:0016853) |
0.2 | 3.6 | GO:0016500 | protein-hormone receptor activity(GO:0016500) |
0.1 | 3.0 | GO:0050136 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
1.0 | 2.9 | GO:0005118 | sevenless binding(GO:0005118) |
0.2 | 2.8 | GO:0019531 | oxalate transmembrane transporter activity(GO:0019531) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.2 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.1 | 2.7 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
0.1 | 2.5 | PID ARF6 PATHWAY | Arf6 signaling events |
0.1 | 1.8 | PID ERB GENOMIC PATHWAY | Validated nuclear estrogen receptor beta network |
0.0 | 1.2 | PID NETRIN PATHWAY | Netrin-mediated signaling events |
0.0 | 0.7 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 0.6 | PID EPHA FWDPATHWAY | EPHA forward signaling |
0.0 | 0.4 | PID ALPHA SYNUCLEIN PATHWAY | Alpha-synuclein signaling |
0.0 | 0.3 | PID PDGFRA PATHWAY | PDGFR-alpha signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.9 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |
0.0 | 2.7 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.0 | 2.7 | REACTOME L1CAM INTERACTIONS | Genes involved in L1CAM interactions |
0.0 | 2.1 | REACTOME DARPP 32 EVENTS | Genes involved in DARPP-32 events |
0.0 | 2.0 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.1 | 1.9 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.0 | 1.9 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.1 | 1.6 | REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLING | Genes involved in Formation of ATP by chemiosmotic coupling |
0.1 | 1.3 | REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS | Genes involved in Tandem pore domain potassium channels |
0.1 | 1.2 | REACTOME SYNTHESIS OF SUBSTRATES IN N GLYCAN BIOSYTHESIS | Genes involved in Synthesis of substrates in N-glycan biosythesis |