avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Gtf2i | mm10_v2_chr5_-_134314637_134314676 | 0.53 | 1.0e-03 | Click! |
Gtf2f1 | mm10_v2_chr17_-_57011271_57011326 | 0.04 | 8.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr9_+_70679016 Show fit | 1.89 |
ENSMUST00000144537.1
|
a disintegrin and metallopeptidase domain 10 |
|
chr15_-_66948419 Show fit | 1.82 |
ENSMUST00000167817.1
|
N-myc downstream regulated gene 1 |
|
chr14_+_54640952 Show fit | 1.78 |
ENSMUST00000169818.2
|
predicted gene, 17606 |
|
chr5_+_43672289 Show fit | 1.69 |
ENSMUST00000156034.1
|
coiled-coil and C2 domain containing 2A |
|
chrX_+_13071470 Show fit | 1.44 |
ENSMUST00000169594.2
|
ubiquitin specific peptidase 9, X chromosome |
|
chr10_-_127620960 Show fit | 1.43 |
ENSMUST00000121829.1
|
low density lipoprotein receptor-related protein 1 |
|
chr17_+_26941420 Show fit | 1.37 |
ENSMUST00000081285.3
ENSMUST00000177932.1 |
synaptic Ras GTPase activating protein 1 homolog (rat) |
|
chr16_-_74411776 Show fit | 1.34 |
ENSMUST00000116586.2
|
roundabout homolog 2 (Drosophila) |
|
chr10_-_127620922 Show fit | 1.32 |
ENSMUST00000118455.1
|
low density lipoprotein receptor-related protein 1 |
|
chr4_-_43558386 Show fit | 1.30 |
ENSMUST00000130353.1
|
talin 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.1 | GO:0010107 | potassium ion import(GO:0010107) |
0.8 | 3.1 | GO:1905167 | positive regulation of lysosomal protein catabolic process(GO:1905167) |
0.9 | 2.6 | GO:0050925 | negative regulation of negative chemotaxis(GO:0050925) |
0.5 | 2.4 | GO:0042117 | monocyte activation(GO:0042117) |
0.3 | 1.8 | GO:1904491 | protein localization to ciliary transition zone(GO:1904491) |
0.2 | 1.8 | GO:0090232 | positive regulation of spindle checkpoint(GO:0090232) |
0.0 | 1.8 | GO:0001578 | microtubule bundle formation(GO:0001578) |
0.2 | 1.7 | GO:1902746 | regulation of lens fiber cell differentiation(GO:1902746) |
0.2 | 1.7 | GO:0032876 | negative regulation of DNA endoreduplication(GO:0032876) |
0.1 | 1.7 | GO:0070884 | regulation of calcineurin-NFAT signaling cascade(GO:0070884) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.5 | GO:0005905 | clathrin-coated pit(GO:0005905) |
0.0 | 4.5 | GO:0014069 | postsynaptic density(GO:0014069) |
0.0 | 4.4 | GO:0005923 | bicellular tight junction(GO:0005923) |
0.0 | 3.3 | GO:0000118 | histone deacetylase complex(GO:0000118) |
0.2 | 2.4 | GO:0097197 | tetraspanin-enriched microdomain(GO:0097197) |
0.1 | 2.4 | GO:0016592 | mediator complex(GO:0016592) |
0.1 | 2.3 | GO:0097470 | ribbon synapse(GO:0097470) |
0.0 | 2.1 | GO:0000775 | chromosome, centromeric region(GO:0000775) |
0.0 | 2.0 | GO:0055038 | recycling endosome membrane(GO:0055038) |
0.2 | 1.9 | GO:0030478 | actin cap(GO:0030478) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.1 | GO:0017137 | Rab GTPase binding(GO:0017137) |
0.0 | 4.7 | GO:0017124 | SH3 domain binding(GO:0017124) |
0.1 | 3.6 | GO:0005242 | inward rectifier potassium channel activity(GO:0005242) |
0.0 | 3.6 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
1.0 | 3.0 | GO:0016964 | alpha-2 macroglobulin receptor activity(GO:0016964) |
0.2 | 2.4 | GO:0008046 | axon guidance receptor activity(GO:0008046) |
0.0 | 2.3 | GO:0043027 | cysteine-type endopeptidase inhibitor activity involved in apoptotic process(GO:0043027) |
0.0 | 2.3 | GO:0042393 | histone binding(GO:0042393) |
0.2 | 1.9 | GO:0030274 | LIM domain binding(GO:0030274) |
0.1 | 1.8 | GO:0050693 | LBD domain binding(GO:0050693) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.9 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
0.0 | 3.7 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.0 | 3.3 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.0 | 3.0 | PID PLK1 PATHWAY | PLK1 signaling events |
0.0 | 2.6 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
0.1 | 2.3 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.1 | 2.1 | PID EPHB FWD PATHWAY | EPHB forward signaling |
0.1 | 2.0 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.0 | 1.6 | PID NEPHRIN NEPH1 PATHWAY | Nephrin/Neph1 signaling in the kidney podocyte |
0.0 | 1.6 | PID PS1 PATHWAY | Presenilin action in Notch and Wnt signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.6 | REACTOME MEIOTIC SYNAPSIS | Genes involved in Meiotic Synapsis |
0.0 | 2.6 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.1 | 2.4 | REACTOME SIGNALING BY ROBO RECEPTOR | Genes involved in Signaling by Robo receptor |
0.2 | 2.3 | REACTOME RECEPTOR LIGAND BINDING INITIATES THE SECOND PROTEOLYTIC CLEAVAGE OF NOTCH RECEPTOR | Genes involved in Receptor-ligand binding initiates the second proteolytic cleavage of Notch receptor |
0.0 | 2.1 | REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS | Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
0.1 | 1.8 | REACTOME DOWNREGULATION OF SMAD2 3 SMAD4 TRANSCRIPTIONAL ACTIVITY | Genes involved in Downregulation of SMAD2/3:SMAD4 transcriptional activity |
0.0 | 1.7 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.0 | 1.6 | REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE | Genes involved in Synthesis of PIPs at the plasma membrane |
0.0 | 1.5 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.0 | 1.4 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |