avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Hes5 | mm10_v2_chr4_+_154960915_154960930 | 0.77 | 2.9e-08 | Click! |
Hes7 | mm10_v2_chr11_+_69120404_69120404 | 0.58 | 2.0e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_12026237 Show fit | 88.25 |
ENSMUST00000150972.1
|
growth factor receptor bound protein 10 |
|
chr11_-_12026732 Show fit | 78.46 |
ENSMUST00000143915.1
|
growth factor receptor bound protein 10 |
|
chr17_-_26199008 Show fit | 43.23 |
ENSMUST00000142410.1
ENSMUST00000120333.1 ENSMUST00000039113.7 |
protein disulfide isomerase associated 2 |
|
chrX_+_8271381 Show fit | 33.24 |
ENSMUST00000033512.4
|
solute carrier family 38, member 5 |
|
chrX_+_8271133 Show fit | 33.16 |
ENSMUST00000127103.1
ENSMUST00000115591.1 |
solute carrier family 38, member 5 |
|
chr12_+_109549157 Show fit | 26.66 |
ENSMUST00000128458.1
ENSMUST00000150851.1 |
maternally expressed 3 |
|
chrX_+_8271642 Show fit | 24.55 |
ENSMUST00000115590.1
|
solute carrier family 38, member 5 |
|
chr8_+_122269569 Show fit | 18.81 |
ENSMUST00000055537.2
|
predicted gene 22 |
|
chr12_+_109459843 Show fit | 15.84 |
ENSMUST00000173812.1
|
delta-like 1 homolog (Drosophila) |
|
chr1_-_193035651 Show fit | 13.11 |
ENSMUST00000016344.7
|
synaptotagmin XIV |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
15.2 | 166.7 | GO:0045719 | negative regulation of glycogen biosynthetic process(GO:0045719) |
5.1 | 90.9 | GO:0015816 | glycine transport(GO:0015816) |
1.0 | 39.8 | GO:1902175 | regulation of oxidative stress-induced intrinsic apoptotic signaling pathway(GO:1902175) |
0.9 | 26.7 | GO:0008340 | determination of adult lifespan(GO:0008340) |
0.1 | 20.8 | GO:0030177 | positive regulation of Wnt signaling pathway(GO:0030177) |
0.5 | 15.8 | GO:0046852 | positive regulation of bone resorption(GO:0045780) positive regulation of bone remodeling(GO:0046852) |
0.7 | 10.1 | GO:0042118 | endothelial cell activation(GO:0042118) |
3.3 | 9.8 | GO:0045660 | positive regulation of neutrophil differentiation(GO:0045660) |
0.3 | 9.7 | GO:1903963 | arachidonic acid secretion(GO:0050482) arachidonate transport(GO:1903963) |
0.1 | 8.6 | GO:0030512 | negative regulation of transforming growth factor beta receptor signaling pathway(GO:0030512) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 140.8 | GO:0005829 | cytosol(GO:0005829) |
0.1 | 84.4 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
0.0 | 9.9 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.0 | 9.6 | GO:0005667 | transcription factor complex(GO:0005667) |
0.5 | 8.7 | GO:0031618 | nuclear pericentric heterochromatin(GO:0031618) |
0.2 | 6.2 | GO:0046540 | U4/U6 x U5 tri-snRNP complex(GO:0046540) |
0.1 | 6.1 | GO:0043034 | costamere(GO:0043034) |
0.1 | 5.4 | GO:0005581 | collagen trimer(GO:0005581) |
0.1 | 5.2 | GO:0036126 | sperm flagellum(GO:0036126) |
0.1 | 4.8 | GO:0005657 | replication fork(GO:0005657) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.4 | 166.7 | GO:0005070 | SH3/SH2 adaptor activity(GO:0005070) |
6.5 | 90.9 | GO:0015187 | glycine transmembrane transporter activity(GO:0015187) |
3.9 | 43.2 | GO:0031545 | peptidyl-proline 4-dioxygenase activity(GO:0031545) |
0.0 | 15.2 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.1 | 10.9 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.3 | 9.8 | GO:0008187 | poly-pyrimidine tract binding(GO:0008187) |
0.2 | 9.7 | GO:0004623 | phospholipase A2 activity(GO:0004623) |
0.1 | 7.2 | GO:0004869 | cysteine-type endopeptidase inhibitor activity(GO:0004869) |
0.0 | 6.6 | GO:0015631 | tubulin binding(GO:0015631) |
0.2 | 5.4 | GO:0017147 | Wnt-protein binding(GO:0017147) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.9 | 166.7 | PID IGF1 PATHWAY | IGF1 pathway |
0.4 | 41.9 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.2 | 16.3 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.1 | 15.2 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.2 | 12.7 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.1 | 9.2 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.4 | 6.6 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.1 | 6.1 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.2 | 5.4 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.5 | 4.8 | SA G2 AND M PHASES | Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
7.9 | 166.7 | REACTOME SIGNAL ATTENUATION | Genes involved in Signal attenuation |
1.9 | 90.9 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.1 | 21.1 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.4 | 15.8 | REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS | Genes involved in Activated NOTCH1 Transmits Signal to the Nucleus |
0.5 | 9.7 | REACTOME ACYL CHAIN REMODELLING OF PS | Genes involved in Acyl chain remodelling of PS |
0.5 | 4.8 | REACTOME G2 M DNA DAMAGE CHECKPOINT | Genes involved in G2/M DNA damage checkpoint |
0.2 | 4.7 | REACTOME G0 AND EARLY G1 | Genes involved in G0 and Early G1 |
0.2 | 4.6 | REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM | Genes involved in Branched-chain amino acid catabolism |
0.1 | 4.0 | REACTOME IL1 SIGNALING | Genes involved in Interleukin-1 signaling |
0.0 | 3.0 | REACTOME MEIOTIC SYNAPSIS | Genes involved in Meiotic Synapsis |