avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Hinfp | mm10_v2_chr9_-_44305595_44305688 | 0.67 | 6.7e-06 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_102365111 Show fit | 8.15 |
ENSMUST00000006749.9
|
solute carrier family 4 (anion exchanger), member 1 |
|
chr2_-_121036750 Show fit | 6.93 |
ENSMUST00000023987.5
|
erythrocyte protein band 4.2 |
|
chr3_-_152166230 Show fit | 6.46 |
ENSMUST00000046614.9
|
GIPC PDZ domain containing family, member 2 |
|
chr2_-_121037048 Show fit | 5.63 |
ENSMUST00000102490.3
|
erythrocyte protein band 4.2 |
|
chr1_-_88205674 Show fit | 5.10 |
ENSMUST00000119972.2
|
DnaJ (Hsp40) homolog, subfamily B, member 3 |
|
chr4_+_52439235 Show fit | 4.63 |
ENSMUST00000117280.1
ENSMUST00000102915.3 ENSMUST00000142227.1 |
structural maintenance of chromosomes 2 |
|
chr1_-_128592284 Show fit | 4.60 |
ENSMUST00000052172.6
ENSMUST00000142893.1 |
chemokine (C-X-C motif) receptor 4 |
|
chr14_-_60177482 Show fit | 4.46 |
ENSMUST00000140924.1
|
ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 |
|
chr5_-_100159261 Show fit | 4.17 |
ENSMUST00000139520.1
|
transmembrane protein 150C |
|
chr19_-_34166037 Show fit | 4.09 |
ENSMUST00000025686.7
|
ankyrin repeat domain 22 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 10.2 | GO:0010032 | meiotic chromosome condensation(GO:0010032) |
0.3 | 8.1 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.4 | 6.9 | GO:0030953 | astral microtubule organization(GO:0030953) |
0.1 | 5.8 | GO:0001824 | blastocyst development(GO:0001824) |
1.1 | 5.4 | GO:0007089 | traversing start control point of mitotic cell cycle(GO:0007089) |
0.3 | 4.8 | GO:0001833 | inner cell mass cell proliferation(GO:0001833) |
0.8 | 4.7 | GO:0003065 | positive regulation of heart rate by epinephrine(GO:0003065) |
1.1 | 4.6 | GO:0035470 | positive regulation of vascular wound healing(GO:0035470) |
0.6 | 4.5 | GO:0061091 | regulation of phospholipid translocation(GO:0061091) positive regulation of phospholipid translocation(GO:0061092) |
1.1 | 4.4 | GO:0006014 | D-ribose metabolic process(GO:0006014) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 13.7 | GO:0000796 | condensin complex(GO:0000796) |
0.1 | 7.5 | GO:0014704 | intercalated disc(GO:0014704) |
0.1 | 7.1 | GO:0005882 | intermediate filament(GO:0005882) |
0.0 | 5.5 | GO:0001669 | acrosomal vesicle(GO:0001669) |
0.0 | 5.0 | GO:0005681 | spliceosomal complex(GO:0005681) |
0.2 | 4.9 | GO:0000145 | exocyst(GO:0000145) |
0.4 | 4.7 | GO:0005862 | muscle thin filament tropomyosin(GO:0005862) |
0.0 | 4.6 | GO:0005811 | lipid particle(GO:0005811) |
1.0 | 3.8 | GO:0000942 | condensed nuclear chromosome outer kinetochore(GO:0000942) |
0.5 | 3.6 | GO:0031465 | Cul4B-RING E3 ubiquitin ligase complex(GO:0031465) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 12.1 | GO:0003697 | single-stranded DNA binding(GO:0003697) |
0.0 | 8.2 | GO:0004842 | ubiquitin-protein transferase activity(GO:0004842) |
0.4 | 8.1 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
0.1 | 7.3 | GO:0043425 | bHLH transcription factor binding(GO:0043425) |
0.0 | 5.3 | GO:0008201 | heparin binding(GO:0008201) |
0.7 | 4.6 | GO:0032027 | myosin light chain binding(GO:0032027) |
0.1 | 4.5 | GO:0004012 | phospholipid-translocating ATPase activity(GO:0004012) |
0.4 | 4.3 | GO:0015180 | L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858) |
0.1 | 4.3 | GO:0061650 | ubiquitin conjugating enzyme activity(GO:0061631) ubiquitin-like protein conjugating enzyme activity(GO:0061650) |
0.6 | 3.8 | GO:0010997 | anaphase-promoting complex binding(GO:0010997) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 10.3 | PID AURORA B PATHWAY | Aurora B signaling |
0.2 | 8.5 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.2 | 6.1 | PID AURORA A PATHWAY | Aurora A signaling |
0.1 | 5.4 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
0.1 | 4.9 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.0 | 4.0 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.1 | 3.6 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.2 | 3.4 | PID RANBP2 PATHWAY | Sumoylation by RanBP2 regulates transcriptional repression |
0.0 | 2.8 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.1 | 2.7 | PID ERBB1 INTERNALIZATION PATHWAY | Internalization of ErbB1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.8 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.1 | 6.7 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.2 | 6.1 | REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX | Genes involved in Activation of the pre-replicative complex |
1.1 | 4.6 | REACTOME BINDING AND ENTRY OF HIV VIRION | Genes involved in Binding and entry of HIV virion |
0.1 | 4.4 | REACTOME MEIOTIC SYNAPSIS | Genes involved in Meiotic Synapsis |
0.1 | 4.3 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.2 | 3.8 | REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION | Genes involved in Cyclin A/B1 associated events during G2/M transition |
0.1 | 3.7 | REACTOME CLEAVAGE OF GROWING TRANSCRIPT IN THE TERMINATION REGION | Genes involved in Cleavage of Growing Transcript in the Termination Region |
0.0 | 3.7 | REACTOME MRNA SPLICING | Genes involved in mRNA Splicing |
0.1 | 3.3 | REACTOME SYNTHESIS OF GLYCOSYLPHOSPHATIDYLINOSITOL GPI | Genes involved in Synthesis of glycosylphosphatidylinositol (GPI) |