avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Hivep1 | mm10_v2_chr13_+_42052015_42052072 | 0.15 | 3.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_+_80000292 Show fit | 2.99 |
ENSMUST00000088735.3
|
olfactomedin 4 |
|
chr17_-_33890539 Show fit | 2.54 |
ENSMUST00000173386.1
|
kinesin family member C1 |
|
chr17_-_33890584 Show fit | 2.47 |
ENSMUST00000114361.2
ENSMUST00000173492.1 |
kinesin family member C1 |
|
chr7_-_4397705 Show fit | 2.25 |
ENSMUST00000108590.2
|
glycoprotein 6 (platelet) |
|
chr15_-_79164477 Show fit | 2.23 |
ENSMUST00000040019.4
|
SRY-box containing gene 10 |
|
chr1_+_74791516 Show fit | 2.05 |
ENSMUST00000006718.8
|
wingless related MMTV integration site 10a |
|
chr16_+_45610380 Show fit | 1.84 |
ENSMUST00000161347.2
ENSMUST00000023339.4 |
germinal center associated, signaling and motility |
|
chr7_+_30422389 Show fit | 1.79 |
ENSMUST00000108175.1
|
nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, delta |
|
chr17_+_26917091 Show fit | 1.77 |
ENSMUST00000078961.4
|
kinesin family member C5B |
|
chr12_+_109747903 Show fit | 1.76 |
ENSMUST00000183084.1
ENSMUST00000182300.1 |
miRNA containing gene |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 5.6 | GO:0038063 | collagen-activated tyrosine kinase receptor signaling pathway(GO:0038063) |
1.7 | 5.0 | GO:0072382 | minus-end-directed vesicle transport along microtubule(GO:0072382) |
0.5 | 4.7 | GO:0006268 | DNA unwinding involved in DNA replication(GO:0006268) |
0.3 | 3.2 | GO:0070245 | positive regulation of thymocyte apoptotic process(GO:0070245) |
0.1 | 3.0 | GO:1900026 | positive regulation of substrate adhesion-dependent cell spreading(GO:1900026) |
0.5 | 2.7 | GO:0060931 | sinoatrial node cell development(GO:0060931) |
0.5 | 2.7 | GO:0042699 | follicle-stimulating hormone signaling pathway(GO:0042699) |
0.2 | 2.6 | GO:0051601 | exocyst localization(GO:0051601) |
0.4 | 2.2 | GO:0010626 | negative regulation of Schwann cell proliferation(GO:0010626) |
0.1 | 2.1 | GO:0048733 | sebaceous gland development(GO:0048733) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.0 | GO:0031616 | spindle pole centrosome(GO:0031616) |
0.3 | 4.7 | GO:0042555 | MCM complex(GO:0042555) |
0.0 | 3.9 | GO:0042383 | sarcolemma(GO:0042383) |
0.2 | 3.0 | GO:0042581 | specific granule(GO:0042581) |
0.2 | 2.7 | GO:0031143 | pseudopodium(GO:0031143) |
0.1 | 2.6 | GO:0000145 | exocyst(GO:0000145) |
0.2 | 2.3 | GO:0097197 | tetraspanin-enriched microdomain(GO:0097197) |
0.2 | 2.2 | GO:0031315 | extrinsic component of mitochondrial outer membrane(GO:0031315) |
0.0 | 1.8 | GO:0005871 | kinesin complex(GO:0005871) |
0.5 | 1.5 | GO:0033193 | Lsd1/2 complex(GO:0033193) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.0 | GO:0008569 | ATP-dependent microtubule motor activity, minus-end-directed(GO:0008569) |
0.1 | 4.7 | GO:0004003 | ATP-dependent DNA helicase activity(GO:0004003) |
0.4 | 4.6 | GO:0038064 | collagen receptor activity(GO:0038064) |
0.0 | 3.2 | GO:0000149 | SNARE binding(GO:0000149) |
0.1 | 3.0 | GO:0017160 | Ral GTPase binding(GO:0017160) |
0.9 | 2.7 | GO:0031896 | V2 vasopressin receptor binding(GO:0031896) |
0.1 | 2.7 | GO:0030552 | cAMP binding(GO:0030552) |
0.0 | 2.1 | GO:0005109 | frizzled binding(GO:0005109) |
0.0 | 1.9 | GO:1990841 | promoter-specific chromatin binding(GO:1990841) |
0.6 | 1.8 | GO:0045159 | myosin II binding(GO:0045159) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.3 | PID ATR PATHWAY | ATR signaling pathway |
0.1 | 2.7 | PID IL8 CXCR1 PATHWAY | IL8- and CXCR1-mediated signaling events |
0.0 | 1.6 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 1.4 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
0.0 | 1.3 | PID CD8 TCR DOWNSTREAM PATHWAY | Downstream signaling in naïve CD8+ T cells |
0.0 | 1.0 | PID INTEGRIN A4B1 PATHWAY | Alpha4 beta1 integrin signaling events |
0.0 | 0.8 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
0.0 | 0.4 | PID CXCR3 PATHWAY | CXCR3-mediated signaling events |
0.0 | 0.4 | PID EPHB FWD PATHWAY | EPHB forward signaling |
0.0 | 0.4 | PID IL12 2PATHWAY | IL12-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.0 | REACTOME KINESINS | Genes involved in Kinesins |
0.3 | 4.7 | REACTOME UNWINDING OF DNA | Genes involved in Unwinding of DNA |
0.1 | 2.7 | REACTOME LYSOSOME VESICLE BIOGENESIS | Genes involved in Lysosome Vesicle Biogenesis |
0.0 | 2.1 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.0 | 1.6 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.0 | 1.6 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.0 | 1.5 | REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS | Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
0.0 | 1.1 | REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS | Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis |
0.1 | 1.0 | REACTOME P130CAS LINKAGE TO MAPK SIGNALING FOR INTEGRINS | Genes involved in p130Cas linkage to MAPK signaling for integrins |
0.0 | 0.5 | REACTOME PD1 SIGNALING | Genes involved in PD-1 signaling |