avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Hmbox1 | mm10_v2_chr14_-_64949632_64949674 | 0.25 | 1.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_39287074 Show fit | 8.65 |
ENSMUST00000003137.8
|
cytochrome P450, family 2, subfamily c, polypeptide 29 |
|
chr14_+_37068042 Show fit | 4.95 |
ENSMUST00000057176.3
|
leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 |
|
chr11_-_78422217 Show fit | 4.33 |
ENSMUST00000001122.5
|
solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 |
|
chr10_-_115362191 Show fit | 2.61 |
ENSMUST00000092170.5
|
transmembrane protein 19 |
|
chr8_+_45507768 Show fit | 2.60 |
ENSMUST00000067065.7
ENSMUST00000098788.3 ENSMUST00000067107.7 ENSMUST00000171337.2 ENSMUST00000138049.1 ENSMUST00000141039.1 |
sorbin and SH3 domain containing 2 |
|
chr11_-_95041335 Show fit | 2.53 |
ENSMUST00000038431.7
|
pyruvate dehydrogenase kinase, isoenzyme 2 |
|
chr18_-_38866702 Show fit | 2.49 |
ENSMUST00000115582.1
|
fibroblast growth factor 1 |
|
chr8_+_45658666 Show fit | 2.44 |
ENSMUST00000134675.1
ENSMUST00000139869.1 ENSMUST00000126067.1 |
sorbin and SH3 domain containing 2 |
|
chr13_+_4434306 Show fit | 2.24 |
ENSMUST00000021630.8
|
aldo-keto reductase family 1, member C6 |
|
chr15_+_55112420 Show fit | 2.23 |
ENSMUST00000100660.4
|
DEP domain containing MTOR-interacting protein |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 7.8 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
0.1 | 6.8 | GO:0003298 | physiological muscle hypertrophy(GO:0003298) physiological cardiac muscle hypertrophy(GO:0003301) cell growth involved in cardiac muscle cell development(GO:0061049) |
0.0 | 4.9 | GO:0098656 | anion transmembrane transport(GO:0098656) |
0.2 | 4.1 | GO:0045792 | negative regulation of cell size(GO:0045792) |
1.0 | 3.0 | GO:1901377 | mycotoxin catabolic process(GO:0043387) aflatoxin catabolic process(GO:0046223) organic heteropentacyclic compound catabolic process(GO:1901377) |
0.0 | 3.0 | GO:0006821 | chloride transport(GO:0006821) |
0.6 | 2.5 | GO:0010510 | regulation of acetyl-CoA biosynthetic process from pyruvate(GO:0010510) |
0.5 | 2.5 | GO:1901509 | regulation of endothelial tube morphogenesis(GO:1901509) |
0.7 | 2.2 | GO:0071395 | response to jasmonic acid(GO:0009753) cellular response to jasmonic acid stimulus(GO:0071395) |
0.7 | 2.2 | GO:0001983 | baroreceptor response to increased systemic arterial blood pressure(GO:0001983) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.7 | GO:0014069 | postsynaptic density(GO:0014069) |
0.0 | 3.0 | GO:0034707 | chloride channel complex(GO:0034707) |
0.0 | 2.9 | GO:0005769 | early endosome(GO:0005769) |
0.8 | 2.5 | GO:0005967 | mitochondrial pyruvate dehydrogenase complex(GO:0005967) |
0.1 | 2.4 | GO:1990124 | messenger ribonucleoprotein complex(GO:1990124) |
0.3 | 2.0 | GO:0033503 | HULC complex(GO:0033503) |
0.0 | 2.0 | GO:0030175 | filopodium(GO:0030175) |
0.0 | 2.0 | GO:0030315 | T-tubule(GO:0030315) |
0.5 | 1.8 | GO:0036019 | endolysosome(GO:0036019) |
0.1 | 1.6 | GO:0005751 | mitochondrial respiratory chain complex IV(GO:0005751) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 8.6 | GO:0033695 | oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor(GO:0033695) caffeine oxidase activity(GO:0034875) |
0.0 | 4.4 | GO:0015293 | symporter activity(GO:0015293) |
0.0 | 3.3 | GO:0005254 | chloride channel activity(GO:0005254) |
0.1 | 2.8 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
0.0 | 2.8 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.6 | 2.5 | GO:0004740 | pyruvate dehydrogenase (acetyl-transferring) kinase activity(GO:0004740) |
0.2 | 2.5 | GO:0044548 | S100 protein binding(GO:0044548) |
0.7 | 2.2 | GO:0047006 | 17-alpha,20-alpha-dihydroxypregn-4-en-3-one dehydrogenase activity(GO:0047006) |
0.6 | 2.2 | GO:0004937 | alpha1-adrenergic receptor activity(GO:0004937) |
0.1 | 2.2 | GO:0051019 | mitogen-activated protein kinase binding(GO:0051019) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.1 | PID MTOR 4PATHWAY | mTOR signaling pathway |
0.0 | 2.5 | PID FGF PATHWAY | FGF signaling pathway |
0.0 | 2.2 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.0 | 2.2 | PID NETRIN PATHWAY | Netrin-mediated signaling events |
0.0 | 1.8 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.0 | 1.4 | PID AVB3 INTEGRIN PATHWAY | Integrins in angiogenesis |
0.0 | 1.1 | PID PI3KCI AKT PATHWAY | Class I PI3K signaling events mediated by Akt |
0.0 | 1.1 | PID VEGFR1 2 PATHWAY | Signaling events mediated by VEGFR1 and VEGFR2 |
0.0 | 0.9 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.0 | 0.8 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 4.2 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.1 | 2.5 | REACTOME SIGNALING BY FGFR3 MUTANTS | Genes involved in Signaling by FGFR3 mutants |
0.1 | 2.2 | REACTOME AMINE LIGAND BINDING RECEPTORS | Genes involved in Amine ligand-binding receptors |
0.0 | 2.1 | REACTOME TRANSPORT OF VITAMINS NUCLEOSIDES AND RELATED MOLECULES | Genes involved in Transport of vitamins, nucleosides, and related molecules |
0.0 | 2.0 | REACTOME NETRIN1 SIGNALING | Genes involved in Netrin-1 signaling |
0.1 | 1.6 | REACTOME KERATAN SULFATE BIOSYNTHESIS | Genes involved in Keratan sulfate biosynthesis |
0.0 | 1.4 | REACTOME PACKAGING OF TELOMERE ENDS | Genes involved in Packaging Of Telomere Ends |
0.1 | 1.2 | REACTOME ACTIVATION OF IRF3 IRF7 MEDIATED BY TBK1 IKK EPSILON | Genes involved in Activation of IRF3/IRF7 mediated by TBK1/IKK epsilon |
0.0 | 1.2 | REACTOME INSULIN SYNTHESIS AND PROCESSING | Genes involved in Insulin Synthesis and Processing |
0.1 | 1.1 | REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION | Genes involved in Apoptosis induced DNA fragmentation |