avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Hmga2 | mm10_v2_chr10_-_120476469_120476527 | 0.05 | 7.7e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr6_+_41392356 Show fit | 14.20 |
ENSMUST00000049079.7
|
predicted gene 5771 |
|
chr6_+_41521782 Show fit | 12.77 |
ENSMUST00000070380.4
|
protease, serine, 2 |
|
chr6_+_41458923 Show fit | 11.11 |
ENSMUST00000031910.7
|
protease, serine, 1 (trypsin 1) |
|
chr6_-_41035501 Show fit | 10.78 |
ENSMUST00000031931.5
|
RIKEN cDNA 2210010C04 gene |
|
chr6_+_41302265 Show fit | 7.85 |
ENSMUST00000031913.4
|
trypsin 4 |
|
chr6_-_40999479 Show fit | 6.61 |
ENSMUST00000166306.1
|
predicted gene 2663 |
|
chr6_+_78380700 Show fit | 2.67 |
ENSMUST00000101272.1
|
regenerating islet-derived 3 alpha |
|
chr7_+_13733502 Show fit | 2.40 |
ENSMUST00000086148.6
|
sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 2 |
|
chr9_-_65422773 Show fit | 2.23 |
ENSMUST00000065894.5
|
solute carrier family 51, beta subunit |
|
chr7_-_14123042 Show fit | 1.68 |
ENSMUST00000098809.2
|
sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 33.7 | GO:0007586 | digestion(GO:0007586) |
0.8 | 12.3 | GO:0031000 | response to caffeine(GO:0031000) |
0.2 | 2.7 | GO:0010838 | positive regulation of keratinocyte proliferation(GO:0010838) |
0.2 | 2.2 | GO:0060050 | positive regulation of protein glycosylation(GO:0060050) |
0.1 | 2.2 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
0.0 | 1.7 | GO:0001578 | microtubule bundle formation(GO:0001578) |
0.2 | 1.2 | GO:0042938 | dipeptide transport(GO:0042938) |
0.1 | 1.2 | GO:0006682 | galactosylceramide biosynthetic process(GO:0006682) galactolipid biosynthetic process(GO:0019375) |
0.3 | 1.1 | GO:0015851 | nucleobase transport(GO:0015851) pyrimidine nucleobase transport(GO:0015855) |
0.3 | 0.9 | GO:0021558 | trochlear nerve development(GO:0021558) auditory receptor cell fate determination(GO:0042668) negative regulation of forebrain neuron differentiation(GO:2000978) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 61.5 | GO:0005615 | extracellular space(GO:0005615) |
0.1 | 0.8 | GO:0032584 | growth cone membrane(GO:0032584) |
0.0 | 0.7 | GO:0031362 | intrinsic component of external side of plasma membrane(GO:0031233) anchored component of external side of plasma membrane(GO:0031362) |
0.0 | 0.7 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
0.1 | 0.6 | GO:0044613 | nuclear pore central transport channel(GO:0044613) |
0.0 | 0.5 | GO:0030992 | intraciliary transport particle B(GO:0030992) |
0.1 | 0.4 | GO:0070044 | synaptobrevin 2-SNAP-25-syntaxin-1a complex(GO:0070044) |
0.0 | 0.4 | GO:0036128 | CatSper complex(GO:0036128) |
0.0 | 0.4 | GO:0036156 | inner dynein arm(GO:0036156) |
0.0 | 0.4 | GO:0030014 | CCR4-NOT complex(GO:0030014) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 63.3 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.4 | 3.0 | GO:0004027 | alcohol sulfotransferase activity(GO:0004027) |
0.0 | 2.4 | GO:0008146 | sulfotransferase activity(GO:0008146) |
0.1 | 1.7 | GO:0070330 | aromatase activity(GO:0070330) |
0.0 | 1.7 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.4 | 1.2 | GO:0042936 | dipeptide transporter activity(GO:0042936) |
0.3 | 1.2 | GO:0047275 | glucosaminylgalactosylglucosylceramide beta-galactosyltransferase activity(GO:0047275) |
0.2 | 1.1 | GO:0005345 | purine nucleobase transmembrane transporter activity(GO:0005345) pyrimidine nucleobase transmembrane transporter activity(GO:0005350) nucleobase transmembrane transporter activity(GO:0015205) glycerol channel activity(GO:0015254) |
0.3 | 0.9 | GO:0071820 | N-box binding(GO:0071820) |
0.1 | 0.9 | GO:0004322 | ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 24.6 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 3.6 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 1.1 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.0 | 0.9 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.0 | 0.8 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.0 | 0.3 | ST IL 13 PATHWAY | Interleukin 13 (IL-13) Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 12.8 | REACTOME DEFENSINS | Genes involved in Defensins |
0.4 | 11.1 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.0 | 1.7 | REACTOME SYNTHESIS OF PA | Genes involved in Synthesis of PA |
0.0 | 1.2 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.1 | 1.1 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |
0.1 | 0.9 | REACTOME FGFR4 LIGAND BINDING AND ACTIVATION | Genes involved in FGFR4 ligand binding and activation |
0.0 | 0.9 | REACTOME METAL ION SLC TRANSPORTERS | Genes involved in Metal ion SLC transporters |
0.0 | 0.9 | REACTOME REGULATION OF BETA CELL DEVELOPMENT | Genes involved in Regulation of beta-cell development |
0.0 | 0.7 | REACTOME G BETA GAMMA SIGNALLING THROUGH PLC BETA | Genes involved in G beta:gamma signalling through PLC beta |
0.0 | 0.5 | REACTOME TRAF6 MEDIATED IRF7 ACTIVATION IN TLR7 8 OR 9 SIGNALING | Genes involved in TRAF6 mediated IRF7 activation in TLR7/8 or 9 signaling |