avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Hmx1 | mm10_v2_chr5_+_35388844_35388882 | 0.32 | 6.0e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_56102458 Show fit | 16.48 |
ENSMUST00000015583.1
|
cathepsin G |
|
chr12_+_109459843 Show fit | 12.74 |
ENSMUST00000173812.1
|
delta-like 1 homolog (Drosophila) |
|
chr14_-_79301623 Show fit | 10.44 |
ENSMUST00000022595.7
|
regulator of cell cycle |
|
chr7_+_18884679 Show fit | 8.14 |
ENSMUST00000032573.6
|
peptidoglycan recognition protein 1 |
|
chr4_+_120666562 Show fit | 6.98 |
ENSMUST00000094814.4
|
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 |
|
chr17_-_33890539 Show fit | 6.74 |
ENSMUST00000173386.1
|
kinesin family member C1 |
|
chr6_+_30738044 Show fit | 6.68 |
ENSMUST00000128398.1
ENSMUST00000163949.2 ENSMUST00000124665.1 |
mesoderm specific transcript |
|
chr13_+_91461050 Show fit | 6.61 |
ENSMUST00000004094.8
ENSMUST00000042122.8 |
single-stranded DNA binding protein 2 |
|
chr17_-_33890584 Show fit | 6.46 |
ENSMUST00000114361.2
ENSMUST00000173492.1 |
kinesin family member C1 |
|
chr11_+_69965396 Show fit | 6.27 |
ENSMUST00000018713.6
|
claudin 7 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 16.5 | GO:0070944 | neutrophil mediated killing of bacterium(GO:0070944) |
4.4 | 13.2 | GO:0072382 | minus-end-directed vesicle transport along microtubule(GO:0072382) |
0.4 | 12.2 | GO:0045780 | positive regulation of bone resorption(GO:0045780) positive regulation of bone remodeling(GO:0046852) |
0.7 | 10.8 | GO:0071688 | striated muscle myosin thick filament assembly(GO:0071688) |
3.5 | 10.4 | GO:0003330 | regulation of extracellular matrix constituent secretion(GO:0003330) positive regulation of extracellular matrix constituent secretion(GO:0003331) |
0.1 | 8.3 | GO:0048747 | muscle fiber development(GO:0048747) |
2.7 | 8.1 | GO:0051714 | regulation of cytolysis in other organism(GO:0051710) positive regulation of cytolysis in other organism(GO:0051714) |
0.1 | 7.0 | GO:0010883 | regulation of lipid storage(GO:0010883) |
2.2 | 6.5 | GO:1905000 | regulation of membrane repolarization during atrial cardiac muscle cell action potential(GO:1905000) |
0.3 | 6.3 | GO:0032463 | negative regulation of protein homooligomerization(GO:0032463) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 18.4 | GO:0005615 | extracellular space(GO:0005615) |
0.2 | 14.4 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
0.6 | 12.8 | GO:0031616 | spindle pole centrosome(GO:0031616) |
0.4 | 10.8 | GO:0005859 | muscle myosin complex(GO:0005859) |
0.0 | 8.6 | GO:0005667 | transcription factor complex(GO:0005667) |
0.1 | 7.1 | GO:0005871 | kinesin complex(GO:0005871) |
1.3 | 6.5 | GO:0031523 | Myb complex(GO:0031523) |
0.9 | 5.6 | GO:0097513 | myosin II filament(GO:0097513) |
0.0 | 5.6 | GO:0005884 | actin filament(GO:0005884) |
0.1 | 5.5 | GO:0031519 | PcG protein complex(GO:0031519) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 18.3 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.5 | 13.2 | GO:0008569 | ATP-dependent microtubule motor activity, minus-end-directed(GO:0008569) |
0.6 | 10.8 | GO:0097493 | structural molecule activity conferring elasticity(GO:0097493) |
0.2 | 10.0 | GO:0070412 | R-SMAD binding(GO:0070412) |
1.6 | 8.1 | GO:0008745 | N-acetylmuramoyl-L-alanine amidase activity(GO:0008745) peptidoglycan receptor activity(GO:0016019) |
0.2 | 8.0 | GO:0030506 | ankyrin binding(GO:0030506) |
0.1 | 7.1 | GO:0003777 | microtubule motor activity(GO:0003777) |
0.1 | 7.0 | GO:0001105 | RNA polymerase II transcription coactivator activity(GO:0001105) |
0.1 | 6.6 | GO:0003697 | single-stranded DNA binding(GO:0003697) |
1.3 | 6.5 | GO:0034988 | Fc-gamma receptor I complex binding(GO:0034988) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 16.0 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.3 | 15.1 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.2 | 13.8 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.2 | 8.5 | PID IL8 CXCR2 PATHWAY | IL8- and CXCR2-mediated signaling events |
0.1 | 4.8 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.1 | 4.2 | PID FCER1 PATHWAY | Fc-epsilon receptor I signaling in mast cells |
0.0 | 4.2 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.0 | 3.9 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 3.6 | PID ERBB1 RECEPTOR PROXIMAL PATHWAY | EGF receptor (ErbB1) signaling pathway |
0.1 | 3.4 | PID RAC1 PATHWAY | RAC1 signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 16.5 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.5 | 13.2 | REACTOME KINESINS | Genes involved in Kinesins |
0.3 | 12.7 | REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS | Genes involved in Activated NOTCH1 Transmits Signal to the Nucleus |
0.3 | 8.6 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.1 | 8.0 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.2 | 7.9 | REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE | Genes involved in Sema4D induced cell migration and growth-cone collapse |
0.2 | 7.7 | REACTOME THE ROLE OF NEF IN HIV1 REPLICATION AND DISEASE PATHOGENESIS | Genes involved in The role of Nef in HIV-1 replication and disease pathogenesis |
0.1 | 5.7 | REACTOME G1 PHASE | Genes involved in G1 Phase |
0.1 | 5.0 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.1 | 3.8 | REACTOME PTM GAMMA CARBOXYLATION HYPUSINE FORMATION AND ARYLSULFATASE ACTIVATION | Genes involved in PTM: gamma carboxylation, hypusine formation and arylsulfatase activation |