avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Homez | mm10_v2_chr14_-_54864055_54864158 | -0.46 | 4.7e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_-_8405060 Show fit | 3.78 |
ENSMUST00000064507.5
ENSMUST00000120540.1 ENSMUST00000096269.4 |
solute carrier family 22, member 30 |
|
chr4_-_61835185 Show fit | 3.27 |
ENSMUST00000082287.2
|
major urinary protein 5 |
|
chr8_-_93229517 Show fit | 3.19 |
ENSMUST00000176282.1
ENSMUST00000034173.7 |
carboxylesterase 1E |
|
chr2_-_24049389 Show fit | 3.13 |
ENSMUST00000051416.5
|
histamine N-methyltransferase |
|
chr6_-_55175019 Show fit | 2.42 |
ENSMUST00000003569.5
|
indolethylamine N-methyltransferase |
|
chr6_+_122006798 Show fit | 2.18 |
ENSMUST00000081777.6
|
murinoglobulin 2 |
|
chr17_+_79626669 Show fit | 2.09 |
ENSMUST00000086570.1
|
RIKEN cDNA 4921513D11 gene |
|
chr13_-_8871751 Show fit | 1.71 |
ENSMUST00000175958.1
|
WD repeat domain 37 |
|
chr3_+_138415484 Show fit | 1.54 |
ENSMUST00000161312.1
ENSMUST00000013458.8 |
alcohol dehydrogenase 4 (class II), pi polypeptide |
|
chr6_+_149141638 Show fit | 1.50 |
ENSMUST00000166416.1
ENSMUST00000111551.1 |
methyltransferase like 20 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 4.5 | GO:0015747 | urate transport(GO:0015747) |
0.6 | 3.1 | GO:0001692 | histamine metabolic process(GO:0001692) |
0.1 | 2.9 | GO:0000470 | maturation of LSU-rRNA(GO:0000470) |
0.8 | 2.5 | GO:0042998 | positive regulation of Golgi to plasma membrane protein transport(GO:0042998) positive regulation of establishment of protein localization to plasma membrane(GO:0090004) |
0.0 | 2.5 | GO:0009308 | amine metabolic process(GO:0009308) |
0.0 | 1.9 | GO:0006687 | glycosphingolipid metabolic process(GO:0006687) |
0.4 | 1.5 | GO:0006069 | ethanol oxidation(GO:0006069) |
0.3 | 1.5 | GO:0070178 | D-serine metabolic process(GO:0070178) |
0.1 | 1.3 | GO:0032402 | melanosome transport(GO:0032402) |
0.3 | 1.2 | GO:0000711 | meiotic DNA repair synthesis(GO:0000711) female meiosis sister chromatid cohesion(GO:0007066) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 2.9 | GO:0070545 | PeBoW complex(GO:0070545) |
0.1 | 1.4 | GO:0005579 | membrane attack complex(GO:0005579) |
0.0 | 1.3 | GO:0042470 | melanosome(GO:0042470) pigment granule(GO:0048770) |
0.3 | 1.2 | GO:0000802 | transverse filament(GO:0000802) |
0.0 | 1.2 | GO:0005811 | lipid particle(GO:0005811) |
0.0 | 1.1 | GO:0005637 | nuclear inner membrane(GO:0005637) |
0.0 | 1.0 | GO:0032040 | small-subunit processome(GO:0032040) |
0.0 | 1.0 | GO:0019005 | SCF ubiquitin ligase complex(GO:0019005) |
0.3 | 0.9 | GO:0048269 | methionine adenosyltransferase complex(GO:0048269) |
0.1 | 0.9 | GO:0097413 | Lewy body(GO:0097413) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.0 | GO:0005550 | pheromone binding(GO:0005550) |
0.3 | 3.8 | GO:0015143 | urate transmembrane transporter activity(GO:0015143) salt transmembrane transporter activity(GO:1901702) |
0.2 | 3.2 | GO:0016290 | palmitoyl-CoA hydrolase activity(GO:0016290) |
0.0 | 3.2 | GO:0008170 | N-methyltransferase activity(GO:0008170) |
0.4 | 2.6 | GO:0008172 | S-methyltransferase activity(GO:0008172) |
0.1 | 2.5 | GO:0102391 | decanoate--CoA ligase activity(GO:0102391) |
0.0 | 2.1 | GO:0043021 | ribonucleoprotein complex binding(GO:0043021) |
0.0 | 1.9 | GO:0004984 | olfactory receptor activity(GO:0004984) |
0.1 | 1.7 | GO:0005347 | ATP transmembrane transporter activity(GO:0005347) ADP transmembrane transporter activity(GO:0015217) |
0.5 | 1.5 | GO:0003960 | NADPH:quinone reductase activity(GO:0003960) alcohol dehydrogenase activity, zinc-dependent(GO:0004024) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.0 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.0 | 1.1 | SIG PIP3 SIGNALING IN CARDIAC MYOCTES | Genes related to PIP3 signaling in cardiac myocytes |
0.0 | 0.8 | ST G ALPHA S PATHWAY | G alpha s Pathway |
0.0 | 0.8 | PID HIF2PATHWAY | HIF-2-alpha transcription factor network |
0.0 | 0.6 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
0.0 | 0.3 | PID S1P S1P4 PATHWAY | S1P4 pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.5 | REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS | Genes involved in Synthesis of very long-chain fatty acyl-CoAs |
0.1 | 1.7 | REACTOME FORMATION OF TRANSCRIPTION COUPLED NER TC NER REPAIR COMPLEX | Genes involved in Formation of transcription-coupled NER (TC-NER) repair complex |
0.1 | 1.6 | REACTOME SULFUR AMINO ACID METABOLISM | Genes involved in Sulfur amino acid metabolism |
0.3 | 1.5 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |
0.0 | 1.5 | REACTOME CROSS PRESENTATION OF SOLUBLE EXOGENOUS ANTIGENS ENDOSOMES | Genes involved in Cross-presentation of soluble exogenous antigens (endosomes) |
0.0 | 1.3 | REACTOME MEIOTIC SYNAPSIS | Genes involved in Meiotic Synapsis |
0.0 | 1.1 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.1 | 1.0 | REACTOME NA CL DEPENDENT NEUROTRANSMITTER TRANSPORTERS | Genes involved in Na+/Cl- dependent neurotransmitter transporters |
0.0 | 1.0 | REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN | Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein |
0.1 | 0.8 | REACTOME PURINE CATABOLISM | Genes involved in Purine catabolism |