avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Hoxa2 | mm10_v2_chr6_-_52165413_52165413 | -0.47 | 3.7e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_+_63344548 Show fit | 29.77 |
ENSMUST00000030044.2
|
orosomucoid 1 |
|
chr4_-_62054112 Show fit | 25.44 |
ENSMUST00000074018.3
|
major urinary protein 20 |
|
chr4_-_62150810 Show fit | 15.94 |
ENSMUST00000077719.3
|
major urinary protein 21 |
|
chr19_-_8131982 Show fit | 14.92 |
ENSMUST00000065651.4
|
solute carrier family 22, member 28 |
|
chr19_-_39463067 Show fit | 12.06 |
ENSMUST00000035488.2
|
cytochrome P450, family 2, subfamily c, polypeptide 38 |
|
chr7_-_46742979 Show fit | 11.99 |
ENSMUST00000128088.1
|
serum amyloid A 1 |
|
chr7_+_27119909 Show fit | 11.23 |
ENSMUST00000003100.8
|
cytochrome P450, family 2, subfamily f, polypeptide 2 |
|
chr2_+_102706356 Show fit | 10.69 |
ENSMUST00000123759.1
ENSMUST00000111212.1 ENSMUST00000005220.4 |
solute carrier family 1 (glial high affinity glutamate transporter), member 2 |
|
chr7_+_44207307 Show fit | 10.00 |
ENSMUST00000077354.4
|
kallikrein 1-related pepidase b4 |
|
chr5_-_87254804 Show fit | 9.93 |
ENSMUST00000075858.3
|
UDP glucuronosyltransferase 2 family, polypeptide B37 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 67.4 | GO:0006953 | acute-phase response(GO:0006953) |
4.2 | 25.4 | GO:0008355 | olfactory learning(GO:0008355) |
1.2 | 16.7 | GO:0015747 | urate transport(GO:0015747) |
0.4 | 15.1 | GO:0019369 | arachidonic acid metabolic process(GO:0019369) |
0.9 | 15.0 | GO:0060363 | cranial suture morphogenesis(GO:0060363) |
3.6 | 14.3 | GO:0032382 | positive regulation of intracellular lipid transport(GO:0032379) positive regulation of intracellular sterol transport(GO:0032382) positive regulation of intracellular cholesterol transport(GO:0032385) lipid hydroperoxide transport(GO:1901373) |
1.2 | 14.3 | GO:0052697 | flavonoid glucuronidation(GO:0052696) xenobiotic glucuronidation(GO:0052697) |
0.4 | 14.2 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
3.5 | 13.9 | GO:0042196 | chlorinated hydrocarbon metabolic process(GO:0042196) halogenated hydrocarbon metabolic process(GO:0042197) |
0.1 | 12.2 | GO:0009636 | response to toxic substance(GO:0009636) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 41.6 | GO:0005783 | endoplasmic reticulum(GO:0005783) |
0.8 | 24.8 | GO:0034364 | high-density lipoprotein particle(GO:0034364) |
0.1 | 21.3 | GO:0072562 | blood microparticle(GO:0072562) |
1.3 | 16.9 | GO:0097418 | neurofibrillary tangle(GO:0097418) |
1.9 | 15.0 | GO:0032937 | SREBP-SCAP-Insig complex(GO:0032937) |
1.0 | 12.7 | GO:0031315 | extrinsic component of mitochondrial outer membrane(GO:0031315) |
0.3 | 10.7 | GO:0030673 | axolemma(GO:0030673) |
0.0 | 9.0 | GO:0000139 | Golgi membrane(GO:0000139) |
1.2 | 8.5 | GO:0008091 | spectrin(GO:0008091) |
0.1 | 7.9 | GO:0005923 | bicellular tight junction(GO:0005923) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 34.5 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
8.5 | 25.4 | GO:0005186 | pheromone activity(GO:0005186) |
0.5 | 24.6 | GO:0004364 | glutathione transferase activity(GO:0004364) |
0.7 | 21.9 | GO:0042056 | chemoattractant activity(GO:0042056) |
1.1 | 16.7 | GO:1901702 | urate transmembrane transporter activity(GO:0015143) salt transmembrane transporter activity(GO:1901702) |
0.1 | 16.3 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
3.6 | 14.4 | GO:0047961 | glycine N-acyltransferase activity(GO:0047961) |
3.6 | 14.3 | GO:1904121 | propanoyl-CoA C-acyltransferase activity(GO:0033814) propionyl-CoA C2-trimethyltridecanoyltransferase activity(GO:0050632) phosphatidylethanolamine transporter activity(GO:1904121) |
4.5 | 13.6 | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates(GO:0016838) |
0.1 | 12.4 | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides(GO:0016811) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 13.4 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.2 | 7.8 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
0.4 | 7.3 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.1 | 6.8 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.1 | 6.7 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.1 | 6.2 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.1 | 5.5 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.1 | 4.1 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.1 | 2.7 | SIG CD40PATHWAYMAP | Genes related to CD40 signaling |
0.0 | 2.5 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 27.7 | REACTOME BILE ACID AND BILE SALT METABOLISM | Genes involved in Bile acid and bile salt metabolism |
0.1 | 15.7 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.2 | 14.1 | REACTOME PHASE II CONJUGATION | Genes involved in Phase II conjugation |
0.1 | 12.1 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.5 | 10.8 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |
0.6 | 9.9 | REACTOME ADVANCED GLYCOSYLATION ENDPRODUCT RECEPTOR SIGNALING | Genes involved in Advanced glycosylation endproduct receptor signaling |
0.1 | 9.3 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.3 | 8.3 | REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION | Genes involved in GABA synthesis, release, reuptake and degradation |
0.2 | 8.1 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.3 | 7.3 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |