avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Hoxa5 | mm10_v2_chr6_-_52204415_52204587 | 0.28 | 9.2e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_-_142661858 Show fit | 3.30 |
ENSMUST00000145896.2
|
insulin-like growth factor 2 |
|
chr16_+_32756336 Show fit | 2.94 |
ENSMUST00000135753.1
|
mucin 4 |
|
chr14_-_47418407 Show fit | 2.05 |
ENSMUST00000043296.3
|
discs, large (Drosophila) homolog-associated protein 5 |
|
chr7_+_26061495 Show fit | 2.04 |
ENSMUST00000005669.7
|
cytochrome P450, family 2, subfamily b, polypeptide 13 |
|
chr3_+_51661167 Show fit | 2.03 |
ENSMUST00000099106.3
|
microsomal glutathione S-transferase 2 |
|
chr11_-_83286722 Show fit | 2.00 |
ENSMUST00000163961.2
|
schlafen family member 14 |
|
chr3_-_98893209 Show fit | 1.92 |
ENSMUST00000029464.7
|
hydroxyacid oxidase 2 |
|
chr8_-_85380964 Show fit | 1.88 |
ENSMUST00000122452.1
|
myosin light chain kinase 3 |
|
chr13_+_23535411 Show fit | 1.72 |
ENSMUST00000080859.5
|
histone cluster 1, H3g |
|
chr6_+_86078070 Show fit | 1.69 |
ENSMUST00000032069.5
|
adducin 2 (beta) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 4.9 | GO:0038028 | insulin receptor signaling pathway via phosphatidylinositol 3-kinase(GO:0038028) |
0.0 | 4.2 | GO:0006397 | mRNA processing(GO:0006397) |
0.6 | 3.6 | GO:0002835 | negative regulation of response to tumor cell(GO:0002835) negative regulation of immune response to tumor cell(GO:0002838) |
0.0 | 3.6 | GO:0051028 | mRNA transport(GO:0051028) |
0.1 | 2.3 | GO:0019370 | leukotriene biosynthetic process(GO:0019370) |
0.4 | 2.2 | GO:0034080 | CENP-A containing nucleosome assembly(GO:0034080) CENP-A containing chromatin organization(GO:0061641) |
0.1 | 2.1 | GO:0045078 | positive regulation of interferon-gamma biosynthetic process(GO:0045078) |
0.1 | 2.1 | GO:0050901 | leukocyte tethering or rolling(GO:0050901) |
0.1 | 2.1 | GO:0006335 | DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723) |
0.3 | 1.9 | GO:0002528 | regulation of vascular permeability involved in acute inflammatory response(GO:0002528) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.9 | GO:0000775 | chromosome, centromeric region(GO:0000775) |
0.1 | 2.9 | GO:0031528 | microvillus membrane(GO:0031528) |
0.1 | 2.1 | GO:0031616 | spindle pole centrosome(GO:0031616) |
0.1 | 2.1 | GO:0000788 | nuclear nucleosome(GO:0000788) |
0.0 | 2.1 | GO:0000786 | nucleosome(GO:0000786) |
0.0 | 2.0 | GO:0005657 | replication fork(GO:0005657) |
0.2 | 1.8 | GO:0008290 | F-actin capping protein complex(GO:0008290) |
0.0 | 1.6 | GO:0005643 | nuclear pore(GO:0005643) |
0.0 | 1.5 | GO:0042641 | actomyosin(GO:0042641) |
0.3 | 1.4 | GO:0043202 | lysosomal lumen(GO:0043202) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.3 | GO:0043539 | protein serine/threonine kinase activator activity(GO:0043539) |
0.7 | 2.9 | GO:0005176 | ErbB-2 class receptor binding(GO:0005176) |
0.1 | 2.8 | GO:0005031 | tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035) |
0.0 | 2.7 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.1 | 2.6 | GO:0048027 | mRNA 5'-UTR binding(GO:0048027) |
0.0 | 2.4 | GO:0001085 | RNA polymerase II transcription factor binding(GO:0001085) |
0.0 | 2.3 | GO:0043022 | ribosome binding(GO:0043022) |
0.3 | 2.1 | GO:0050294 | steroid sulfotransferase activity(GO:0050294) |
0.5 | 2.0 | GO:0004464 | leukotriene-C4 synthase activity(GO:0004464) |
0.0 | 2.0 | GO:0030507 | spectrin binding(GO:0030507) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.9 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.1 | 2.4 | PID AURORA A PATHWAY | Aurora A signaling |
0.0 | 2.3 | PID CDC42 PATHWAY | CDC42 signaling events |
0.0 | 2.1 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 2.0 | PID AURORA B PATHWAY | Aurora B signaling |
0.2 | 1.7 | SA G2 AND M PHASES | Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. |
0.0 | 1.4 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.0 | 1.2 | PID AMB2 NEUTROPHILS PATHWAY | amb2 Integrin signaling |
0.0 | 1.1 | PID ALPHA SYNUCLEIN PATHWAY | Alpha-synuclein signaling |
0.0 | 1.0 | PID ATM PATHWAY | ATM pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 6.7 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.1 | 4.1 | REACTOME DEPOSITION OF NEW CENPA CONTAINING NUCLEOSOMES AT THE CENTROMERE | Genes involved in Deposition of New CENPA-containing Nucleosomes at the Centromere |
0.1 | 3.1 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.1 | 3.1 | REACTOME AMYLOIDS | Genes involved in Amyloids |
0.0 | 2.8 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.2 | 2.6 | REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION | Genes involved in Apoptosis induced DNA fragmentation |
0.0 | 2.1 | REACTOME DIABETES PATHWAYS | Genes involved in Diabetes pathways |
0.0 | 1.9 | REACTOME IRON UPTAKE AND TRANSPORT | Genes involved in Iron uptake and transport |
0.2 | 1.7 | REACTOME G2 M DNA DAMAGE CHECKPOINT | Genes involved in G2/M DNA damage checkpoint |
0.0 | 1.7 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |