avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Hoxb1 | mm10_v2_chr11_+_96365752_96365752 | 0.17 | 3.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr8_+_84901928 Show fit | 4.35 |
ENSMUST00000067060.7
|
Kruppel-like factor 1 (erythroid) |
|
chr14_-_69284982 Show fit | 4.29 |
ENSMUST00000183882.1
ENSMUST00000037064.4 |
solute carrier family 25, member 37 |
|
chr14_-_69503316 Show fit | 3.62 |
ENSMUST00000179116.2
|
predicted gene, 21464 |
|
chr12_+_79208904 Show fit | 3.56 |
ENSMUST00000021548.5
|
retinol dehydrogenase 12 |
|
chr14_-_69503220 Show fit | 3.52 |
ENSMUST00000180059.2
|
predicted gene, 21464 |
|
chr12_+_79208928 Show fit | 3.40 |
ENSMUST00000122227.1
|
retinol dehydrogenase 12 |
|
chr1_-_119053339 Show fit | 3.31 |
ENSMUST00000161301.1
ENSMUST00000161451.1 ENSMUST00000162607.1 |
GLI-Kruppel family member GLI2 |
|
chr9_+_65890237 Show fit | 2.63 |
ENSMUST00000045802.6
|
RIKEN cDNA 2810417H13 gene |
|
chr15_-_95528702 Show fit | 2.11 |
ENSMUST00000166170.1
|
NEL-like 2 |
|
chr1_-_45503282 Show fit | 1.94 |
ENSMUST00000086430.4
|
collagen, type V, alpha 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 7.0 | GO:0042572 | retinol metabolic process(GO:0042572) |
1.3 | 5.2 | GO:0060032 | notochord regression(GO:0060032) |
0.3 | 4.3 | GO:0043249 | erythrocyte maturation(GO:0043249) |
0.1 | 4.3 | GO:0006826 | iron ion transport(GO:0006826) |
0.1 | 2.1 | GO:0046543 | development of secondary female sexual characteristics(GO:0046543) |
0.5 | 1.9 | GO:1903225 | negative regulation of endodermal cell differentiation(GO:1903225) |
0.1 | 1.7 | GO:0071688 | striated muscle myosin thick filament assembly(GO:0071688) |
0.2 | 1.5 | GO:1903847 | regulation of aorta morphogenesis(GO:1903847) positive regulation of aorta morphogenesis(GO:1903849) |
0.0 | 1.5 | GO:0015804 | neutral amino acid transport(GO:0015804) |
0.1 | 1.4 | GO:0031937 | positive regulation of chromatin silencing(GO:0031937) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 5.2 | GO:0097542 | ciliary tip(GO:0097542) |
0.0 | 5.0 | GO:0000790 | nuclear chromatin(GO:0000790) |
0.6 | 1.9 | GO:0005588 | collagen type V trimer(GO:0005588) |
0.0 | 1.9 | GO:0043204 | perikaryon(GO:0043204) |
0.1 | 1.7 | GO:0005859 | muscle myosin complex(GO:0005859) |
0.0 | 1.4 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.0 | 1.1 | GO:0016328 | lateral plasma membrane(GO:0016328) |
0.1 | 1.0 | GO:0005850 | eukaryotic translation initiation factor 2 complex(GO:0005850) |
0.0 | 1.0 | GO:0016363 | nuclear matrix(GO:0016363) |
0.0 | 0.8 | GO:0043196 | varicosity(GO:0043196) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 7.0 | GO:0004745 | retinol dehydrogenase activity(GO:0004745) |
0.1 | 4.6 | GO:1990841 | promoter-specific chromatin binding(GO:1990841) |
0.4 | 4.3 | GO:0015093 | ferrous iron transmembrane transporter activity(GO:0015093) |
0.0 | 4.3 | GO:0033613 | activating transcription factor binding(GO:0033613) |
0.0 | 2.1 | GO:0005080 | protein kinase C binding(GO:0005080) |
0.1 | 1.7 | GO:0097493 | structural molecule activity conferring elasticity(GO:0097493) |
0.0 | 1.5 | GO:0015175 | neutral amino acid transmembrane transporter activity(GO:0015175) |
0.0 | 1.5 | GO:0046875 | ephrin receptor binding(GO:0046875) |
0.0 | 1.4 | GO:0004407 | histone deacetylase activity(GO:0004407) |
0.1 | 1.3 | GO:1990459 | transferrin receptor binding(GO:1990459) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 7.0 | PID CONE PATHWAY | Visual signal transduction: Cones |
0.2 | 5.2 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 1.9 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 1.5 | PID EPHRINB REV PATHWAY | Ephrin B reverse signaling |
0.0 | 1.3 | PID BMP PATHWAY | BMP receptor signaling |
0.0 | 1.0 | PID TCPTP PATHWAY | Signaling events mediated by TCPTP |
0.0 | 0.9 | PID RAS PATHWAY | Regulation of Ras family activation |
0.0 | 0.8 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.0 | 0.7 | PID IL5 PATHWAY | IL5-mediated signaling events |
0.0 | 0.6 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.7 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 2.1 | REACTOME NETRIN1 SIGNALING | Genes involved in Netrin-1 signaling |
0.0 | 1.7 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 1.5 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.0 | 1.1 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.0 | 0.8 | REACTOME AMINE DERIVED HORMONES | Genes involved in Amine-derived hormones |
0.0 | 0.6 | REACTOME NEPHRIN INTERACTIONS | Genes involved in Nephrin interactions |
0.0 | 0.4 | REACTOME SYNTHESIS SECRETION AND INACTIVATION OF GLP1 | Genes involved in Synthesis, Secretion, and Inactivation of Glucagon-like Peptide-1 (GLP-1) |
0.0 | 0.4 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |