avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Dlx2 | mm10_v2_chr2_-_71546745_71546758 | -0.61 | 6.6e-05 | Click! |
Hoxb2 | mm10_v2_chr11_+_96351632_96351632 | -0.60 | 9.6e-05 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_+_60081861 Show fit | 7.01 |
ENSMUST00000029326.5
|
succinate receptor 1 |
|
chr13_+_4434306 Show fit | 5.07 |
ENSMUST00000021630.8
|
aldo-keto reductase family 1, member C6 |
|
chr19_-_7966000 Show fit | 4.53 |
ENSMUST00000182102.1
ENSMUST00000075619.4 |
solute carrier family 22, member 27 |
|
chr6_-_138079916 Show fit | 4.34 |
ENSMUST00000171804.1
|
solute carrier family 15, member 5 |
|
chr3_+_62419668 Show fit | 4.27 |
ENSMUST00000161057.1
|
Rho guanine nucleotide exchange factor (GEF) 26 |
|
chr10_+_127898515 Show fit | 3.52 |
ENSMUST00000047134.7
|
4short chain dehydrogenase/reductase family 9C, member 7 |
|
chr10_-_92375367 Show fit | 3.43 |
ENSMUST00000182870.1
|
predicted gene, 20757 |
|
chr2_+_68104671 Show fit | 3.37 |
ENSMUST00000042456.3
|
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 |
|
chr15_-_60921270 Show fit | 3.12 |
ENSMUST00000096418.3
|
alpha-1-B glycoprotein |
|
chrX_-_143933089 Show fit | 2.94 |
ENSMUST00000087313.3
|
doublecortin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.7 | 5.1 | GO:0009753 | response to jasmonic acid(GO:0009753) cellular response to jasmonic acid stimulus(GO:0071395) |
0.5 | 4.6 | GO:0045919 | positive regulation of cytolysis(GO:0045919) |
0.3 | 4.5 | GO:0015747 | urate transport(GO:0015747) |
0.2 | 4.2 | GO:0048672 | positive regulation of collateral sprouting(GO:0048672) |
0.2 | 4.2 | GO:0001886 | endothelial cell morphogenesis(GO:0001886) |
0.1 | 4.1 | GO:0032728 | positive regulation of interferon-beta production(GO:0032728) |
0.9 | 3.7 | GO:0015851 | nucleobase transport(GO:0015851) pyrimidine nucleobase transport(GO:0015855) |
0.4 | 3.4 | GO:0019375 | galactosylceramide biosynthetic process(GO:0006682) galactolipid biosynthetic process(GO:0019375) |
0.1 | 3.2 | GO:0045603 | positive regulation of endothelial cell differentiation(GO:0045603) |
0.2 | 3.0 | GO:0052695 | cellular glucuronidation(GO:0052695) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.2 | GO:0072562 | blood microparticle(GO:0072562) |
0.1 | 6.6 | GO:0070469 | respiratory chain(GO:0070469) |
0.0 | 6.6 | GO:0000139 | Golgi membrane(GO:0000139) |
0.1 | 6.3 | GO:0005882 | intermediate filament(GO:0005882) |
0.0 | 3.9 | GO:0001650 | fibrillar center(GO:0001650) |
0.0 | 3.3 | GO:0030426 | growth cone(GO:0030426) |
0.0 | 2.5 | GO:0031903 | peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903) |
0.1 | 2.4 | GO:0042470 | melanosome(GO:0042470) pigment granule(GO:0048770) |
0.1 | 1.9 | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276) |
0.0 | 1.6 | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex(GO:0080008) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.7 | GO:0008137 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
1.7 | 5.1 | GO:0047006 | 17-alpha,20-alpha-dihydroxypregn-4-en-3-one dehydrogenase activity(GO:0047006) |
0.7 | 4.6 | GO:0001851 | complement component C3b binding(GO:0001851) |
0.3 | 4.5 | GO:1901702 | urate transmembrane transporter activity(GO:0015143) salt transmembrane transporter activity(GO:1901702) |
0.2 | 3.8 | GO:0004745 | retinol dehydrogenase activity(GO:0004745) |
0.7 | 3.7 | GO:0005345 | purine nucleobase transmembrane transporter activity(GO:0005345) pyrimidine nucleobase transmembrane transporter activity(GO:0005350) nucleobase transmembrane transporter activity(GO:0015205) glycerol channel activity(GO:0015254) |
0.3 | 3.5 | GO:0001594 | trace-amine receptor activity(GO:0001594) |
0.1 | 3.5 | GO:0005160 | transforming growth factor beta receptor binding(GO:0005160) |
0.8 | 3.4 | GO:0047275 | glucosaminylgalactosylglucosylceramide beta-galactosyltransferase activity(GO:0047275) |
0.0 | 3.2 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.2 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
0.0 | 3.3 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 2.9 | PID ALK1 PATHWAY | ALK1 signaling events |
0.0 | 2.7 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 2.1 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 2.1 | PID FGF PATHWAY | FGF signaling pathway |
0.0 | 2.0 | ST PHOSPHOINOSITIDE 3 KINASE PATHWAY | PI3K Pathway |
0.0 | 1.9 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.0 | 1.6 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.0 | 1.4 | PID LYSOPHOSPHOLIPID PATHWAY | LPA receptor mediated events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 8.4 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |
0.3 | 3.7 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |
0.0 | 3.0 | REACTOME L1CAM INTERACTIONS | Genes involved in L1CAM interactions |
0.0 | 2.7 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.1 | 1.6 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |
0.0 | 1.6 | REACTOME AMINE LIGAND BINDING RECEPTORS | Genes involved in Amine ligand-binding receptors |
0.2 | 1.5 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |
0.1 | 1.5 | REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLING | Genes involved in Formation of ATP by chemiosmotic coupling |
0.1 | 1.4 | REACTOME TRYPTOPHAN CATABOLISM | Genes involved in Tryptophan catabolism |
0.1 | 1.4 | REACTOME MITOCHONDRIAL TRNA AMINOACYLATION | Genes involved in Mitochondrial tRNA aminoacylation |