avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Hoxc10 | mm10_v2_chr15_+_102966794_102966812 | -0.03 | 8.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_-_30924169 Show fit | 10.97 |
ENSMUST00000074671.6
|
hepcidin antimicrobial peptide 2 |
|
chr5_+_146079254 Show fit | 7.59 |
ENSMUST00000035571.8
|
cytochrome P450, family 3, subfamily a, polypeptide 59 |
|
chr17_+_31433054 Show fit | 4.17 |
ENSMUST00000136384.1
|
phosphodiesterase 9A |
|
chr17_-_31144271 Show fit | 3.87 |
ENSMUST00000024826.7
|
trefoil factor 2 (spasmolytic protein 1) |
|
chr8_+_45069137 Show fit | 3.86 |
ENSMUST00000067984.7
|
melatonin receptor 1A |
|
chr18_+_20247340 Show fit | 3.44 |
ENSMUST00000054128.6
|
desmoglein 1 gamma |
|
chr14_-_47189406 Show fit | 3.13 |
ENSMUST00000089959.6
|
GTP cyclohydrolase 1 |
|
chr11_+_94211431 Show fit | 2.82 |
ENSMUST00000041589.5
|
transducer of ErbB-2.1 |
|
chr7_-_73537621 Show fit | 2.68 |
ENSMUST00000172704.1
|
chromodomain helicase DNA binding protein 2 |
|
chr1_+_127729405 Show fit | 2.64 |
ENSMUST00000038006.6
|
amino carboxymuconate semialdehyde decarboxylase |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.7 | 11.0 | GO:0034760 | negative regulation of iron ion transport(GO:0034757) negative regulation of iron ion transmembrane transport(GO:0034760) |
0.3 | 5.1 | GO:0030828 | positive regulation of cGMP biosynthetic process(GO:0030828) |
0.6 | 4.5 | GO:0060455 | negative regulation of gastric acid secretion(GO:0060455) |
0.8 | 4.2 | GO:2000255 | negative regulation of male germ cell proliferation(GO:2000255) |
0.2 | 4.2 | GO:0046069 | cGMP catabolic process(GO:0046069) |
0.8 | 3.1 | GO:0014916 | regulation of lung blood pressure(GO:0014916) |
0.0 | 3.0 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
0.1 | 2.9 | GO:0015813 | L-glutamate transport(GO:0015813) |
0.3 | 2.8 | GO:0031441 | negative regulation of mRNA 3'-end processing(GO:0031441) |
0.7 | 2.7 | GO:0090126 | protein complex assembly involved in synapse maturation(GO:0090126) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.4 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.2 | 5.3 | GO:0030057 | desmosome(GO:0030057) |
0.0 | 3.8 | GO:0043204 | perikaryon(GO:0043204) |
0.0 | 3.6 | GO:0005791 | rough endoplasmic reticulum(GO:0005791) |
0.2 | 2.8 | GO:0036056 | filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057) |
0.1 | 2.8 | GO:0030014 | CCR4-NOT complex(GO:0030014) |
0.0 | 2.5 | GO:0070469 | respiratory chain(GO:0070469) |
0.0 | 2.4 | GO:0005657 | replication fork(GO:0005657) |
0.1 | 2.1 | GO:0045179 | apical cortex(GO:0045179) |
0.0 | 2.1 | GO:0005882 | intermediate filament(GO:0005882) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.6 | GO:0005179 | hormone activity(GO:0005179) |
1.5 | 7.6 | GO:0008390 | testosterone 16-alpha-hydroxylase activity(GO:0008390) |
1.0 | 4.9 | GO:0008502 | melatonin receptor activity(GO:0008502) |
1.1 | 4.2 | GO:0004667 | prostaglandin-D synthase activity(GO:0004667) |
0.2 | 4.2 | GO:0047555 | 3',5'-cyclic-GMP phosphodiesterase activity(GO:0047555) |
0.3 | 3.9 | GO:0045236 | CXCR chemokine receptor binding(GO:0045236) |
0.5 | 3.1 | GO:0019238 | cyclohydrolase activity(GO:0019238) |
0.0 | 3.0 | GO:0030971 | receptor tyrosine kinase binding(GO:0030971) |
0.2 | 2.9 | GO:0005314 | high-affinity glutamate transmembrane transporter activity(GO:0005314) |
0.2 | 2.7 | GO:0097109 | neuroligin family protein binding(GO:0097109) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.8 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.1 | 4.0 | PID FOXO PATHWAY | FoxO family signaling |
0.0 | 2.0 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 1.6 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 1.6 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.1 | 1.5 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 1.5 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.0 | 1.4 | PID IFNG PATHWAY | IFN-gamma pathway |
0.0 | 1.4 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.1 | 1.1 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.0 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |
0.2 | 3.1 | REACTOME TETRAHYDROBIOPTERIN BH4 SYNTHESIS RECYCLING SALVAGE AND REGULATION | Genes involved in Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation |
0.0 | 3.1 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
0.1 | 2.6 | REACTOME TRYPTOPHAN CATABOLISM | Genes involved in Tryptophan catabolism |
0.1 | 2.1 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |
0.0 | 2.1 | REACTOME PPARA ACTIVATES GENE EXPRESSION | Genes involved in PPARA Activates Gene Expression |
0.2 | 1.6 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |
0.1 | 1.5 | REACTOME SHC1 EVENTS IN ERBB4 SIGNALING | Genes involved in SHC1 events in ERBB4 signaling |
0.1 | 1.4 | REACTOME CALNEXIN CALRETICULIN CYCLE | Genes involved in Calnexin/calreticulin cycle |
0.0 | 1.0 | REACTOME GLUCONEOGENESIS | Genes involved in Gluconeogenesis |