avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Hoxc13 | mm10_v2_chr15_+_102921103_102921132 | -0.25 | 1.5e-01 | Click! |
Hoxd13 | mm10_v2_chr2_+_74668207_74668310 | -0.21 | 2.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_+_119625939 Show fit | 2.24 |
ENSMUST00000156235.1
|
predicted gene 16063 |
|
chr5_-_66080971 Show fit | 1.59 |
ENSMUST00000127275.1
ENSMUST00000113724.1 |
RNA binding motif protein 47 |
|
chr17_-_31144271 Show fit | 1.48 |
ENSMUST00000024826.7
|
trefoil factor 2 (spasmolytic protein 1) |
|
chr18_-_38209762 Show fit | 1.48 |
ENSMUST00000057185.6
|
protocadherin 1 |
|
chr4_-_141825997 Show fit | 1.46 |
ENSMUST00000102481.3
|
chymotrypsin-like elastase family, member 2A |
|
chr5_+_114146525 Show fit | 1.10 |
ENSMUST00000102582.1
|
acetyl-Coenzyme A carboxylase beta |
|
chr7_-_73537621 Show fit | 1.01 |
ENSMUST00000172704.1
|
chromodomain helicase DNA binding protein 2 |
|
chr10_+_87859481 Show fit | 0.94 |
ENSMUST00000121952.1
|
insulin-like growth factor 1 |
|
chr10_+_87859593 Show fit | 0.92 |
ENSMUST00000126490.1
|
insulin-like growth factor 1 |
|
chr7_+_67647405 Show fit | 0.89 |
ENSMUST00000032774.8
ENSMUST00000107471.1 |
tetratricopeptide repeat domain 23 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 2.6 | GO:1904075 | regulation of trophectodermal cell proliferation(GO:1904073) positive regulation of trophectodermal cell proliferation(GO:1904075) |
0.2 | 1.6 | GO:0016554 | cytidine to uridine editing(GO:0016554) |
0.2 | 1.5 | GO:0060455 | negative regulation of gastric acid secretion(GO:0060455) |
0.1 | 1.5 | GO:0016339 | calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0016339) |
0.4 | 1.1 | GO:2001293 | fatty-acyl-CoA biosynthetic process(GO:0046949) malonyl-CoA metabolic process(GO:2001293) |
0.0 | 1.0 | GO:0061436 | establishment of skin barrier(GO:0061436) |
0.3 | 0.9 | GO:0006583 | melanin biosynthetic process from tyrosine(GO:0006583) |
0.0 | 0.9 | GO:0060218 | hematopoietic stem cell differentiation(GO:0060218) |
0.0 | 0.9 | GO:0034755 | iron ion transmembrane transport(GO:0034755) |
0.1 | 0.7 | GO:0001550 | ovarian cumulus expansion(GO:0001550) fused antrum stage(GO:0048165) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 2.6 | GO:0042567 | alphav-beta3 integrin-IGF-1-IGF1R complex(GO:0035867) insulin-like growth factor ternary complex(GO:0042567) |
0.0 | 2.6 | GO:0005882 | intermediate filament(GO:0005882) |
0.0 | 0.9 | GO:0048770 | melanosome(GO:0042470) pigment granule(GO:0048770) |
0.2 | 0.7 | GO:0031088 | platelet dense granule membrane(GO:0031088) |
0.0 | 0.7 | GO:0045334 | clathrin-coated endocytic vesicle(GO:0045334) |
0.0 | 0.7 | GO:0045171 | intercellular bridge(GO:0045171) |
0.0 | 0.6 | GO:0035102 | PRC1 complex(GO:0035102) |
0.0 | 0.5 | GO:0000138 | Golgi trans cisterna(GO:0000138) |
0.0 | 0.4 | GO:0005786 | signal recognition particle receptor complex(GO:0005785) signal recognition particle, endoplasmic reticulum targeting(GO:0005786) |
0.1 | 0.3 | GO:0036488 | CHOP-C/EBP complex(GO:0036488) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.6 | GO:0043539 | insulin-like growth factor receptor binding(GO:0005159) protein serine/threonine kinase activator activity(GO:0043539) |
0.1 | 1.5 | GO:0045236 | CXCR chemokine receptor binding(GO:0045236) |
0.2 | 1.1 | GO:0003989 | acetyl-CoA carboxylase activity(GO:0003989) |
0.2 | 0.9 | GO:0070287 | ferritin receptor activity(GO:0070287) |
0.0 | 0.9 | GO:0016863 | intramolecular oxidoreductase activity, transposing C=C bonds(GO:0016863) |
0.1 | 0.8 | GO:0015252 | hydrogen ion channel activity(GO:0015252) |
0.2 | 0.7 | GO:0005220 | inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity(GO:0005220) |
0.1 | 0.7 | GO:0005025 | transforming growth factor beta receptor activity, type I(GO:0005025) |
0.0 | 0.7 | GO:0005086 | ARF guanyl-nucleotide exchange factor activity(GO:0005086) |
0.0 | 0.7 | GO:0019003 | GDP binding(GO:0019003) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.9 | PID IGF1 PATHWAY | IGF1 pathway |
0.0 | 0.7 | PID BMP PATHWAY | BMP receptor signaling |
0.0 | 0.7 | ST T CELL SIGNAL TRANSDUCTION | T Cell Signal Transduction |
0.0 | 0.6 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.0 | 0.4 | PID NFKAPPAB ATYPICAL PATHWAY | Atypical NF-kappaB pathway |
0.0 | 0.4 | PID IL3 PATHWAY | IL3-mediated signaling events |
0.0 | 0.3 | PID EPO PATHWAY | EPO signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | REACTOME ACTIVATED AMPK STIMULATES FATTY ACID OXIDATION IN MUSCLE | Genes involved in Activated AMPK stimulates fatty-acid oxidation in muscle |
0.0 | 0.7 | REACTOME SIGNALING BY BMP | Genes involved in Signaling by BMP |
0.0 | 0.7 | REACTOME CTLA4 INHIBITORY SIGNALING | Genes involved in CTLA4 inhibitory signaling |
0.0 | 0.5 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.0 | 0.4 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |
0.0 | 0.4 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 0.3 | REACTOME REGULATION OF KIT SIGNALING | Genes involved in Regulation of KIT signaling |
0.0 | 0.3 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |