avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Hoxc9 | mm10_v2_chr15_+_102977032_102977032 | 0.08 | 6.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_102658640 Show fit | 4.46 |
ENSMUST00000080210.3
|
solute carrier family 1 (glial high affinity glutamate transporter), member 2 |
|
chr2_+_70474923 Show fit | 2.33 |
ENSMUST00000100043.2
|
trans-acting transcription factor 5 |
|
chr7_+_131032061 Show fit | 1.33 |
ENSMUST00000084509.3
|
deleted in malignant brain tumors 1 |
|
chr1_+_187997835 Show fit | 1.25 |
ENSMUST00000110938.1
|
estrogen-related receptor gamma |
|
chr1_+_187997821 Show fit | 1.22 |
ENSMUST00000027906.6
|
estrogen-related receptor gamma |
|
chr4_-_109202217 Show fit | 1.12 |
ENSMUST00000160774.1
ENSMUST00000030288.7 ENSMUST00000162787.2 |
oxysterol binding protein-like 9 |
|
chr8_+_118283719 Show fit | 1.05 |
ENSMUST00000117160.1
|
cadherin 13 |
|
chr6_+_54269135 Show fit | 0.95 |
ENSMUST00000114401.1
|
chimerin (chimaerin) 2 |
|
chr18_+_65582281 Show fit | 0.92 |
ENSMUST00000183319.1
|
zinc finger protein 532 |
|
chr10_+_4710119 Show fit | 0.85 |
ENSMUST00000105588.1
ENSMUST00000105589.1 |
estrogen receptor 1 (alpha) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 4.5 | GO:0070777 | D-aspartate transport(GO:0070777) D-aspartate import(GO:0070779) |
0.1 | 3.2 | GO:0048384 | retinoic acid receptor signaling pathway(GO:0048384) |
0.1 | 2.3 | GO:0036342 | post-anal tail morphogenesis(GO:0036342) |
0.1 | 1.3 | GO:0001833 | inner cell mass cell proliferation(GO:0001833) |
0.2 | 1.2 | GO:0060690 | epithelial cell differentiation involved in salivary gland development(GO:0060690) |
0.2 | 1.1 | GO:0055095 | lipoprotein particle mediated signaling(GO:0055095) low-density lipoprotein particle mediated signaling(GO:0055096) |
0.1 | 0.9 | GO:0060523 | Sertoli cell proliferation(GO:0060011) prostate epithelial cord elongation(GO:0060523) |
0.0 | 0.9 | GO:0046676 | negative regulation of insulin secretion(GO:0046676) |
0.1 | 0.8 | GO:0021913 | regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification(GO:0021912) regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification(GO:0021913) |
0.1 | 0.8 | GO:0048672 | positive regulation of collateral sprouting(GO:0048672) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.5 | GO:0030673 | axolemma(GO:0030673) |
0.2 | 1.3 | GO:0030670 | phagocytic vesicle membrane(GO:0030670) |
0.1 | 1.2 | GO:0005915 | zonula adherens(GO:0005915) |
0.1 | 0.9 | GO:0097550 | transcriptional preinitiation complex(GO:0097550) |
0.1 | 0.7 | GO:0044308 | axonal spine(GO:0044308) |
0.0 | 0.5 | GO:0045334 | clathrin-coated endocytic vesicle(GO:0045334) |
0.0 | 0.5 | GO:0048770 | melanosome(GO:0042470) pigment granule(GO:0048770) |
0.1 | 0.4 | GO:0002193 | MAML1-RBP-Jkappa- ICN1 complex(GO:0002193) |
0.1 | 0.3 | GO:1990707 | subtelomeric heterochromatin(GO:1990421) nuclear subtelomeric heterochromatin(GO:1990707) |
0.0 | 0.3 | GO:0014731 | spectrin-associated cytoskeleton(GO:0014731) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 4.5 | GO:0015501 | glutamate:sodium symporter activity(GO:0015501) |
0.1 | 2.5 | GO:0003708 | retinoic acid receptor activity(GO:0003708) |
0.4 | 1.8 | GO:0055100 | adiponectin binding(GO:0055100) |
0.0 | 1.3 | GO:0005044 | scavenger receptor activity(GO:0005044) |
0.3 | 0.9 | GO:0031798 | type 1 metabotropic glutamate receptor binding(GO:0031798) RNA polymerase II transcription factor activity, estrogen-activated sequence-specific DNA binding(GO:0038052) |
0.1 | 0.8 | GO:0052650 | NADP-retinol dehydrogenase activity(GO:0052650) |
0.0 | 0.8 | GO:0005504 | fatty acid binding(GO:0005504) |
0.1 | 0.7 | GO:0015386 | potassium:proton antiporter activity(GO:0015386) |
0.1 | 0.7 | GO:0019855 | calcium channel inhibitor activity(GO:0019855) |
0.0 | 0.7 | GO:0008536 | Ran GTPase binding(GO:0008536) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.3 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.0 | 1.2 | PID ECADHERIN KERATINOCYTE PATHWAY | E-cadherin signaling in keratinocytes |
0.0 | 0.9 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
0.0 | 0.9 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.0 | 0.8 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.0 | 0.6 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 0.4 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.5 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.0 | 3.3 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.1 | 2.2 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 0.7 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.0 | 0.6 | REACTOME ACTIVATED POINT MUTANTS OF FGFR2 | Genes involved in Activated point mutants of FGFR2 |
0.0 | 0.5 | REACTOME ANDROGEN BIOSYNTHESIS | Genes involved in Androgen biosynthesis |
0.0 | 0.5 | REACTOME CTLA4 INHIBITORY SIGNALING | Genes involved in CTLA4 inhibitory signaling |
0.0 | 0.3 | REACTOME MITOCHONDRIAL FATTY ACID BETA OXIDATION | Genes involved in Mitochondrial Fatty Acid Beta-Oxidation |