avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Hsf1 | mm10_v2_chr15_+_76477404_76477461 | 0.03 | 8.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_-_149636164 Show fit | 2.05 |
ENSMUST00000076410.4
|
heat shock 105kDa/110kDa protein 1 |
|
chr7_+_140845562 Show fit | 1.57 |
ENSMUST00000035300.5
|
secretoglobin, family 1C, member 1 |
|
chr12_-_110696289 Show fit | 1.23 |
ENSMUST00000021698.6
|
heat shock protein 90, alpha (cytosolic), class A member 1 |
|
chr16_-_88751628 Show fit | 1.17 |
ENSMUST00000053149.2
|
keratin associated protein 13 |
|
chr6_-_128438673 Show fit | 1.17 |
ENSMUST00000032508.4
|
FK506 binding protein 4 |
|
chr5_-_149636331 Show fit | 1.12 |
ENSMUST00000074846.7
ENSMUST00000110498.1 ENSMUST00000127977.1 ENSMUST00000132412.1 |
heat shock 105kDa/110kDa protein 1 |
|
chr12_-_110695860 Show fit | 1.09 |
ENSMUST00000149189.1
|
heat shock protein 90, alpha (cytosolic), class A member 1 |
|
chr1_+_195017399 Show fit | 1.02 |
ENSMUST00000181273.1
|
RIKEN cDNA A330023F24 gene |
|
chr12_-_110696248 Show fit | 0.97 |
ENSMUST00000124156.1
|
heat shock protein 90, alpha (cytosolic), class A member 1 |
|
chr5_+_30281377 Show fit | 0.88 |
ENSMUST00000101448.3
|
dynein regulatory complex subunit 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 4.1 | GO:0045583 | regulation of cytotoxic T cell differentiation(GO:0045583) positive regulation of cytotoxic T cell differentiation(GO:0045585) |
0.5 | 3.2 | GO:1903750 | regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide(GO:1903750) negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide(GO:1903751) |
0.1 | 1.2 | GO:0042769 | DNA damage response, detection of DNA damage(GO:0042769) |
0.1 | 1.2 | GO:0099640 | positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway(GO:0038033) axo-dendritic protein transport(GO:0099640) |
0.1 | 1.2 | GO:0031115 | negative regulation of microtubule polymerization(GO:0031115) |
0.2 | 1.0 | GO:0055071 | cellular manganese ion homeostasis(GO:0030026) Golgi calcium ion homeostasis(GO:0032468) manganese ion homeostasis(GO:0055071) |
0.0 | 1.0 | GO:0010501 | RNA secondary structure unwinding(GO:0010501) |
0.2 | 0.9 | GO:0060715 | syncytiotrophoblast cell differentiation involved in labyrinthine layer development(GO:0060715) |
0.2 | 0.9 | GO:0035063 | nuclear speck organization(GO:0035063) |
0.1 | 0.9 | GO:0032876 | negative regulation of DNA endoreduplication(GO:0032876) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 4.1 | GO:0097226 | sperm mitochondrial sheath(GO:0097226) |
0.0 | 1.2 | GO:0044295 | axonal growth cone(GO:0044295) |
0.1 | 1.0 | GO:0097512 | cardiac myofibril(GO:0097512) |
0.1 | 0.8 | GO:0071598 | neuronal ribonucleoprotein granule(GO:0071598) |
0.0 | 0.6 | GO:0034663 | endoplasmic reticulum chaperone complex(GO:0034663) |
0.1 | 0.4 | GO:0016035 | zeta DNA polymerase complex(GO:0016035) |
0.0 | 0.4 | GO:0035985 | senescence-associated heterochromatin focus(GO:0035985) |
0.0 | 0.4 | GO:0042612 | MHC class I protein complex(GO:0042612) |
0.1 | 0.3 | GO:0070826 | paraferritin complex(GO:0070826) |
0.0 | 0.3 | GO:0046696 | lipopolysaccharide receptor complex(GO:0046696) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 3.5 | GO:0002135 | CTP binding(GO:0002135) |
0.4 | 3.2 | GO:0000774 | adenyl-nucleotide exchange factor activity(GO:0000774) |
0.1 | 2.7 | GO:0044183 | protein binding involved in protein folding(GO:0044183) |
0.2 | 1.2 | GO:0032767 | copper-dependent protein binding(GO:0032767) |
0.2 | 1.0 | GO:0015410 | manganese-transporting ATPase activity(GO:0015410) |
0.0 | 1.0 | GO:0003743 | translation initiation factor activity(GO:0003743) |
0.1 | 0.8 | GO:0001069 | regulatory region RNA binding(GO:0001069) |
0.1 | 0.8 | GO:0016018 | cyclosporin A binding(GO:0016018) |
0.2 | 0.7 | GO:0004647 | phosphoserine phosphatase activity(GO:0004647) |
0.1 | 0.7 | GO:0055131 | C3HC4-type RING finger domain binding(GO:0055131) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.1 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 1.2 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 1.2 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 1.2 | PID REG GR PATHWAY | Glucocorticoid receptor regulatory network |
0.0 | 0.9 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.0 | 0.7 | PID PLK1 PATHWAY | PLK1 signaling events |
0.0 | 0.6 | PID IL6 7 PATHWAY | IL6-mediated signaling events |
0.0 | 0.3 | PID AURORA A PATHWAY | Aurora A signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.1 | REACTOME TETRAHYDROBIOPTERIN BH4 SYNTHESIS RECYCLING SALVAGE AND REGULATION | Genes involved in Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation |
0.0 | 1.0 | REACTOME DEADENYLATION OF MRNA | Genes involved in Deadenylation of mRNA |
0.0 | 1.0 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.0 | 0.9 | REACTOME DESTABILIZATION OF MRNA BY AUF1 HNRNP D0 | Genes involved in Destabilization of mRNA by AUF1 (hnRNP D0) |
0.0 | 0.9 | REACTOME MEIOTIC SYNAPSIS | Genes involved in Meiotic Synapsis |
0.0 | 0.7 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |
0.1 | 0.6 | REACTOME ACTIVATION OF CHAPERONE GENES BY ATF6 ALPHA | Genes involved in Activation of Chaperone Genes by ATF6-alpha |
0.0 | 0.6 | REACTOME IRAK1 RECRUITS IKK COMPLEX | Genes involved in IRAK1 recruits IKK complex |
0.1 | 0.4 | REACTOME REGULATION OF ORNITHINE DECARBOXYLASE ODC | Genes involved in Regulation of ornithine decarboxylase (ODC) |
0.0 | 0.3 | REACTOME PROCESSING OF INTRONLESS PRE MRNAS | Genes involved in Processing of Intronless Pre-mRNAs |