avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Ikzf2 | mm10_v2_chr1_-_69685937_69685966 | 0.49 | 2.4e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_+_58394381 Show fit | 2.07 |
ENSMUST00000105468.1
|
LIM and senescent cell antigen-like domains 1 |
|
chr7_-_134232005 Show fit | 2.04 |
ENSMUST00000134504.1
|
a disintegrin and metallopeptidase domain 12 (meltrin alpha) |
|
chr10_+_58394361 Show fit | 1.98 |
ENSMUST00000020077.4
|
LIM and senescent cell antigen-like domains 1 |
|
chr19_-_59943000 Show fit | 1.97 |
ENSMUST00000170819.1
|
RAB11 family interacting protein 2 (class I) |
|
chr3_-_116129615 Show fit | 1.94 |
ENSMUST00000029574.8
|
vascular cell adhesion molecule 1 |
|
chr7_-_134232125 Show fit | 1.73 |
ENSMUST00000127524.1
|
a disintegrin and metallopeptidase domain 12 (meltrin alpha) |
|
chr5_-_148392810 Show fit | 1.51 |
ENSMUST00000138257.1
|
solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 |
|
chr4_-_44168252 Show fit | 1.49 |
ENSMUST00000145760.1
ENSMUST00000128426.1 |
ring finger protein 38 |
|
chr14_-_72709534 Show fit | 1.45 |
ENSMUST00000162478.1
|
fibronectin type III domain containing 3A |
|
chr9_+_124101944 Show fit | 1.41 |
ENSMUST00000171719.1
|
chemokine (C-C motif) receptor 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 4.1 | GO:2000346 | negative regulation of hepatocyte proliferation(GO:2000346) |
0.1 | 3.3 | GO:0051482 | positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway(GO:0051482) |
0.9 | 2.7 | GO:0002436 | immune complex clearance by monocytes and macrophages(GO:0002436) astrocyte chemotaxis(GO:0035700) regulation of immune complex clearance by monocytes and macrophages(GO:0090264) positive regulation of immune complex clearance by monocytes and macrophages(GO:0090265) negative regulation of eosinophil activation(GO:1902567) positive regulation of CD8-positive, alpha-beta T cell extravasation(GO:2000451) regulation of astrocyte chemotaxis(GO:2000458) |
0.0 | 2.4 | GO:0061049 | physiological muscle hypertrophy(GO:0003298) physiological cardiac muscle hypertrophy(GO:0003301) cell growth involved in cardiac muscle cell development(GO:0061049) |
0.0 | 2.0 | GO:0035773 | insulin secretion involved in cellular response to glucose stimulus(GO:0035773) |
0.6 | 1.9 | GO:0033082 | regulation of extrathymic T cell differentiation(GO:0033082) |
0.1 | 1.9 | GO:0060710 | chorio-allantoic fusion(GO:0060710) |
0.1 | 1.5 | GO:0015809 | arginine transport(GO:0015809) |
0.0 | 1.4 | GO:0060009 | Sertoli cell development(GO:0060009) |
0.2 | 1.3 | GO:0033031 | positive regulation of neutrophil apoptotic process(GO:0033031) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.7 | GO:0002102 | podosome(GO:0002102) |
0.0 | 2.2 | GO:0036126 | sperm flagellum(GO:0036126) |
0.1 | 1.8 | GO:0032982 | myosin filament(GO:0032982) |
0.1 | 1.6 | GO:0005942 | phosphatidylinositol 3-kinase complex(GO:0005942) |
0.1 | 1.5 | GO:0005677 | chromatin silencing complex(GO:0005677) |
0.0 | 1.3 | GO:0005905 | clathrin-coated pit(GO:0005905) |
0.0 | 1.3 | GO:0001669 | acrosomal vesicle(GO:0001669) |
0.4 | 1.2 | GO:0005588 | collagen type V trimer(GO:0005588) |
0.0 | 1.1 | GO:0044295 | axonal growth cone(GO:0044295) |
0.1 | 1.0 | GO:0032591 | dendritic spine membrane(GO:0032591) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.5 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.9 | 2.7 | GO:0035717 | chemokine (C-C motif) ligand 7 binding(GO:0035717) |
0.1 | 2.7 | GO:1990841 | promoter-specific chromatin binding(GO:1990841) |
0.2 | 1.9 | GO:0008131 | primary amine oxidase activity(GO:0008131) |
0.2 | 1.5 | GO:0015181 | arginine transmembrane transporter activity(GO:0015181) |
0.0 | 1.4 | GO:0036002 | pre-mRNA binding(GO:0036002) |
0.1 | 1.3 | GO:0046934 | phosphatidylinositol-4,5-bisphosphate 3-kinase activity(GO:0046934) phosphatidylinositol bisphosphate kinase activity(GO:0052813) |
0.0 | 1.2 | GO:0070888 | bHLH transcription factor binding(GO:0043425) E-box binding(GO:0070888) |
0.0 | 1.2 | GO:0031491 | nucleosome binding(GO:0031491) |
0.0 | 1.2 | GO:0019894 | kinesin binding(GO:0019894) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.7 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.1 | 4.1 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.0 | 1.9 | PID P53 DOWNSTREAM PATHWAY | Direct p53 effectors |
0.0 | 1.6 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.0 | 1.3 | SA TRKA RECEPTOR | The TrkA receptor binds nerve growth factor to activate MAP kinase pathways and promote cell growth. |
0.0 | 1.0 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 1.0 | PID NFAT 3PATHWAY | Role of Calcineurin-dependent NFAT signaling in lymphocytes |
0.0 | 0.8 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
0.0 | 0.8 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 0.8 | PID NFKAPPAB CANONICAL PATHWAY | Canonical NF-kappaB pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.9 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.0 | 3.8 | REACTOME SIGNALING BY EGFR IN CANCER | Genes involved in Signaling by EGFR in Cancer |
0.5 | 2.7 | REACTOME BETA DEFENSINS | Genes involved in Beta defensins |
0.0 | 1.9 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.0 | 1.4 | REACTOME DEPOSITION OF NEW CENPA CONTAINING NUCLEOSOMES AT THE CENTROMERE | Genes involved in Deposition of New CENPA-containing Nucleosomes at the Centromere |
0.0 | 1.2 | REACTOME REGULATION OF WATER BALANCE BY RENAL AQUAPORINS | Genes involved in Regulation of Water Balance by Renal Aquaporins |
0.0 | 1.0 | REACTOME REGULATION OF SIGNALING BY CBL | Genes involved in Regulation of signaling by CBL |
0.0 | 1.0 | REACTOME TRAFFICKING OF AMPA RECEPTORS | Genes involved in Trafficking of AMPA receptors |
0.0 | 1.0 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 0.9 | REACTOME DEADENYLATION OF MRNA | Genes involved in Deadenylation of mRNA |