avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Irf6 | mm10_v2_chr1_+_193153107_193153116 | 0.49 | 2.3e-03 | Click! |
Irf5 | mm10_v2_chr6_+_29526625_29526685 | 0.05 | 7.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_-_141010759 Show fit | 4.59 |
ENSMUST00000026565.6
|
interferon induced transmembrane protein 3 |
|
chr1_+_130826676 Show fit | 3.62 |
ENSMUST00000027675.7
|
polymeric immunoglobulin receptor |
|
chr1_+_130826762 Show fit | 3.49 |
ENSMUST00000133792.1
|
polymeric immunoglobulin receptor |
|
chr17_-_34862122 Show fit | 3.37 |
ENSMUST00000154526.1
|
complement factor B |
|
chr17_+_31433054 Show fit | 2.75 |
ENSMUST00000136384.1
|
phosphodiesterase 9A |
|
chr9_+_55326913 Show fit | 2.45 |
ENSMUST00000085754.3
ENSMUST00000034862.4 |
expressed sequence AI118078 |
|
chr17_-_34862473 Show fit | 1.68 |
ENSMUST00000025229.4
ENSMUST00000176203.2 ENSMUST00000128767.1 |
complement factor B |
|
chr4_-_40239779 Show fit | 1.65 |
ENSMUST00000037907.6
|
DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 |
|
chr6_-_124911636 Show fit | 1.62 |
ENSMUST00000032217.1
|
lymphocyte-activation gene 3 |
|
chr2_-_77170534 Show fit | 1.53 |
ENSMUST00000111833.2
|
coiled-coil domain containing 141 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 7.1 | GO:0002415 | immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor(GO:0002415) |
0.3 | 6.5 | GO:0032897 | negative regulation of viral transcription(GO:0032897) |
0.3 | 5.1 | GO:0006957 | complement activation, alternative pathway(GO:0006957) |
0.1 | 3.4 | GO:1900017 | positive regulation of cytokine production involved in inflammatory response(GO:1900017) |
0.2 | 2.8 | GO:0046069 | cGMP catabolic process(GO:0046069) |
0.2 | 2.6 | GO:0070673 | response to interleukin-18(GO:0070673) |
0.4 | 2.2 | GO:0009597 | detection of virus(GO:0009597) |
0.0 | 2.1 | GO:0021799 | cerebral cortex radially oriented cell migration(GO:0021799) |
0.0 | 2.0 | GO:0010257 | NADH dehydrogenase complex assembly(GO:0010257) mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031) |
0.3 | 1.7 | GO:0019805 | quinolinate biosynthetic process(GO:0019805) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 7.1 | GO:0055038 | recycling endosome membrane(GO:0055038) |
0.0 | 4.1 | GO:0072562 | blood microparticle(GO:0072562) |
0.1 | 3.4 | GO:0045271 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.0 | 2.8 | GO:0043204 | perikaryon(GO:0043204) |
0.0 | 2.2 | GO:0032587 | ruffle membrane(GO:0032587) |
0.0 | 2.1 | GO:0030018 | Z disc(GO:0030018) |
0.0 | 0.7 | GO:0016327 | apicolateral plasma membrane(GO:0016327) |
0.0 | 0.7 | GO:0005614 | interstitial matrix(GO:0005614) |
0.0 | 0.6 | GO:0032809 | neuronal cell body membrane(GO:0032809) |
0.1 | 0.5 | GO:0097427 | microtubule bundle(GO:0097427) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 7.1 | GO:0019763 | immunoglobulin receptor activity(GO:0019763) |
0.0 | 5.1 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.1 | 3.9 | GO:0003950 | NAD+ ADP-ribosyltransferase activity(GO:0003950) |
0.1 | 3.4 | GO:0008137 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
0.1 | 2.8 | GO:0047555 | 3',5'-cyclic-GMP phosphodiesterase activity(GO:0047555) |
0.3 | 2.7 | GO:0030368 | interleukin-17 receptor activity(GO:0030368) |
0.0 | 2.4 | GO:0003725 | double-stranded RNA binding(GO:0003725) |
0.3 | 1.7 | GO:0016174 | NAD(P)H oxidase activity(GO:0016174) |
0.2 | 1.6 | GO:0042289 | MHC class II protein binding(GO:0042289) |
0.2 | 1.2 | GO:0016936 | galactoside binding(GO:0016936) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.0 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.2 | 5.1 | ST G ALPHA S PATHWAY | G alpha s Pathway |
0.0 | 2.8 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 2.6 | PID TGFBR PATHWAY | TGF-beta receptor signaling |
0.0 | 1.0 | PID MYC PATHWAY | C-MYC pathway |
0.0 | 0.9 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 0.8 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.1 | 0.5 | ST TYPE I INTERFERON PATHWAY | Type I Interferon (alpha/beta IFN) Pathway |
0.0 | 0.5 | PID NFKAPPAB CANONICAL PATHWAY | Canonical NF-kappaB pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.8 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.4 | 5.1 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |
0.2 | 3.3 | REACTOME TRAF3 DEPENDENT IRF ACTIVATION PATHWAY | Genes involved in TRAF3-dependent IRF activation pathway |
0.2 | 2.9 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |
0.1 | 2.8 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |
0.0 | 2.0 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.1 | 1.7 | REACTOME TRYPTOPHAN CATABOLISM | Genes involved in Tryptophan catabolism |
0.0 | 0.9 | REACTOME SHC1 EVENTS IN ERBB4 SIGNALING | Genes involved in SHC1 events in ERBB4 signaling |
0.0 | 0.8 | REACTOME STEROID HORMONES | Genes involved in Steroid hormones |
0.0 | 0.7 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |