avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Isl2 | mm10_v2_chr9_+_55541148_55541209 | -0.69 | 2.6e-06 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_-_8131982 Show fit | 15.88 |
ENSMUST00000065651.4
|
solute carrier family 22, member 28 |
|
chr9_-_48605147 Show fit | 14.37 |
ENSMUST00000034808.5
ENSMUST00000119426.1 |
nicotinamide N-methyltransferase |
|
chr1_-_139858684 Show fit | 9.82 |
ENSMUST00000094489.3
|
complement factor H-related 2 |
|
chr19_-_7966000 Show fit | 9.45 |
ENSMUST00000182102.1
ENSMUST00000075619.4 |
solute carrier family 22, member 27 |
|
chr8_+_114133601 Show fit | 9.27 |
ENSMUST00000109109.1
|
nudix (nucleoside diphosphate linked moiety X)-type motif 7 |
|
chr4_+_115299046 Show fit | 8.89 |
ENSMUST00000084343.3
|
cytochrome P450, family 4, subfamily a, polypeptide 12a |
|
chr3_+_138374121 Show fit | 8.84 |
ENSMUST00000171054.1
|
alcohol dehydrogenase 6 (class V), pseudogene 1 |
|
chr8_+_114133635 Show fit | 8.31 |
ENSMUST00000147605.1
ENSMUST00000134593.1 |
nudix (nucleoside diphosphate linked moiety X)-type motif 7 |
|
chr8_+_114133557 Show fit | 7.51 |
ENSMUST00000073521.5
ENSMUST00000066514.6 |
nudix (nucleoside diphosphate linked moiety X)-type motif 7 |
|
chr19_+_39510844 Show fit | 6.85 |
ENSMUST00000025968.4
|
cytochrome P450, family 2, subfamily c, polypeptide 39 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 25.3 | GO:0015747 | urate transport(GO:0015747) |
6.3 | 25.1 | GO:0034031 | coenzyme A catabolic process(GO:0015938) nucleoside bisphosphate catabolic process(GO:0033869) ribonucleoside bisphosphate catabolic process(GO:0034031) purine nucleoside bisphosphate catabolic process(GO:0034034) acetyl-CoA catabolic process(GO:0046356) |
0.4 | 14.3 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
0.6 | 9.4 | GO:0060363 | cranial suture morphogenesis(GO:0060363) |
0.8 | 9.3 | GO:0052696 | flavonoid glucuronidation(GO:0052696) xenobiotic glucuronidation(GO:0052697) |
0.0 | 8.1 | GO:0032259 | methylation(GO:0032259) |
0.8 | 4.7 | GO:0002317 | plasma cell differentiation(GO:0002317) |
0.0 | 4.6 | GO:0016052 | carbohydrate catabolic process(GO:0016052) |
1.5 | 4.4 | GO:0018879 | biphenyl metabolic process(GO:0018879) |
0.2 | 4.0 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone(GO:0006120) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 29.4 | GO:0042579 | peroxisome(GO:0005777) microbody(GO:0042579) |
0.1 | 11.1 | GO:0070469 | respiratory chain(GO:0070469) |
1.2 | 9.4 | GO:0032937 | SREBP-SCAP-Insig complex(GO:0032937) |
0.0 | 6.3 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.0 | 4.9 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.0 | 4.7 | GO:0001750 | photoreceptor outer segment(GO:0001750) |
0.3 | 4.4 | GO:0034663 | endoplasmic reticulum chaperone complex(GO:0034663) |
0.1 | 2.7 | GO:0000930 | gamma-tubulin complex(GO:0000930) |
0.1 | 2.7 | GO:0005614 | interstitial matrix(GO:0005614) |
0.2 | 2.6 | GO:0045275 | respiratory chain complex III(GO:0045275) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.7 | 25.3 | GO:1901702 | urate transmembrane transporter activity(GO:0015143) salt transmembrane transporter activity(GO:1901702) |
5.0 | 25.1 | GO:0003986 | acetyl-CoA hydrolase activity(GO:0003986) |
0.5 | 18.6 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
0.1 | 14.1 | GO:0008170 | N-methyltransferase activity(GO:0008170) |
0.4 | 10.3 | GO:0008137 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
1.5 | 8.9 | GO:0018685 | alkane 1-monooxygenase activity(GO:0018685) |
0.3 | 7.4 | GO:0008392 | arachidonic acid epoxygenase activity(GO:0008392) |
1.1 | 6.9 | GO:0034875 | oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor(GO:0033695) caffeine oxidase activity(GO:0034875) |
1.8 | 5.4 | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity(GO:0008113) |
1.2 | 4.9 | GO:0047961 | glycine N-acyltransferase activity(GO:0047961) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.8 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 0.7 | PID NETRIN PATHWAY | Netrin-mediated signaling events |
0.0 | 0.6 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.0 | 0.6 | PID AURORA B PATHWAY | Aurora B signaling |
0.0 | 0.3 | PID DNA PK PATHWAY | DNA-PK pathway in nonhomologous end joining |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 17.2 | REACTOME PHASE II CONJUGATION | Genes involved in Phase II conjugation |
0.7 | 9.0 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |
0.1 | 4.1 | REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS | Genes involved in Golgi Associated Vesicle Biogenesis |
0.3 | 3.1 | REACTOME THE ACTIVATION OF ARYLSULFATASES | Genes involved in The activation of arylsulfatases |
0.1 | 2.7 | REACTOME DARPP 32 EVENTS | Genes involved in DARPP-32 events |
0.1 | 2.5 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.1 | 2.5 | REACTOME ENOS ACTIVATION AND REGULATION | Genes involved in eNOS activation and regulation |
0.0 | 2.2 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.2 | 1.8 | REACTOME ACTIVATION OF CHAPERONE GENES BY ATF6 ALPHA | Genes involved in Activation of Chaperone Genes by ATF6-alpha |
0.0 | 1.8 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |