avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Junb | mm10_v2_chr8_-_84978709_84978748 | 0.14 | 4.2e-01 | Click! |
Jund | mm10_v2_chr8_+_70697739_70697739 | 0.01 | 9.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr13_-_54688246 Show fit | 1.69 |
ENSMUST00000122935.1
ENSMUST00000128257.1 |
ring finger protein 44 |
|
chr6_-_124464772 Show fit | 1.46 |
ENSMUST00000008297.4
|
calsyntenin 3 |
|
chr13_-_54687644 Show fit | 1.23 |
ENSMUST00000129881.1
|
ring finger protein 44 |
|
chr13_-_54688264 Show fit | 1.10 |
ENSMUST00000150626.1
ENSMUST00000134177.1 |
ring finger protein 44 |
|
chr5_-_137149320 Show fit | 1.09 |
ENSMUST00000041226.8
|
mucin 3, intestinal |
|
chr9_+_53850243 Show fit | 0.87 |
ENSMUST00000048485.5
|
sarcolipin |
|
chr13_+_113209659 Show fit | 0.86 |
ENSMUST00000038144.8
|
endothelial cell-specific molecule 1 |
|
chr7_+_112679327 Show fit | 0.83 |
ENSMUST00000106638.2
|
TEA domain family member 1 |
|
chr10_-_17947997 Show fit | 0.80 |
ENSMUST00000037879.6
|
headcase homolog (Drosophila) |
|
chr13_-_54688184 Show fit | 0.79 |
ENSMUST00000150806.1
ENSMUST00000125927.1 |
ring finger protein 44 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.4 | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process(GO:0043161) |
0.1 | 1.5 | GO:1902474 | positive regulation of protein localization to synapse(GO:1902474) |
0.3 | 1.3 | GO:0019287 | isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287) |
0.2 | 1.3 | GO:0045585 | regulation of cytotoxic T cell differentiation(GO:0045583) positive regulation of cytotoxic T cell differentiation(GO:0045585) |
0.2 | 1.3 | GO:0090074 | negative regulation of protein homodimerization activity(GO:0090074) |
0.1 | 1.3 | GO:0051256 | mitotic spindle midzone assembly(GO:0051256) |
0.0 | 1.1 | GO:0007019 | microtubule depolymerization(GO:0007019) |
0.3 | 1.0 | GO:0045204 | MAPK export from nucleus(GO:0045204) |
0.1 | 1.0 | GO:0006104 | succinyl-CoA metabolic process(GO:0006104) |
0.2 | 0.9 | GO:1902202 | regulation of hepatocyte growth factor receptor signaling pathway(GO:1902202) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 1.3 | GO:0097226 | sperm mitochondrial sheath(GO:0097226) |
0.0 | 1.2 | GO:0072686 | mitotic spindle(GO:0072686) |
0.0 | 1.1 | GO:0043034 | costamere(GO:0043034) |
0.0 | 1.1 | GO:0032154 | cleavage furrow(GO:0032154) cell surface furrow(GO:0097610) |
0.2 | 0.9 | GO:0071148 | TEAD-1-YAP complex(GO:0071148) |
0.1 | 0.9 | GO:0045252 | oxoglutarate dehydrogenase complex(GO:0045252) |
0.0 | 0.8 | GO:0030131 | clathrin adaptor complex(GO:0030131) |
0.1 | 0.7 | GO:0031205 | endoplasmic reticulum Sec complex(GO:0031205) |
0.1 | 0.7 | GO:0044352 | pinosome(GO:0044352) macropinosome(GO:0044354) |
0.0 | 0.5 | GO:0008385 | IkappaB kinase complex(GO:0008385) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.7 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
0.1 | 1.4 | GO:0048273 | mitogen-activated protein kinase p38 binding(GO:0048273) |
0.2 | 1.3 | GO:0002135 | CTP binding(GO:0002135) |
0.0 | 1.1 | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity(GO:0008138) |
0.2 | 1.0 | GO:0034602 | oxoglutarate dehydrogenase (NAD+) activity(GO:0034602) |
0.3 | 0.9 | GO:0005171 | hepatocyte growth factor receptor binding(GO:0005171) |
0.1 | 0.9 | GO:0031802 | type 5 metabotropic glutamate receptor binding(GO:0031802) |
0.1 | 0.9 | GO:0051010 | microtubule plus-end binding(GO:0051010) |
0.0 | 0.9 | GO:0001134 | transcription factor activity, transcription factor recruiting(GO:0001134) |
0.0 | 0.9 | GO:1990841 | promoter-specific chromatin binding(GO:1990841) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.2 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 1.2 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.0 | 1.1 | ST G ALPHA S PATHWAY | G alpha s Pathway |
0.0 | 1.0 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 0.9 | PID PLK1 PATHWAY | PLK1 signaling events |
0.0 | 0.6 | PID P38 ALPHA BETA PATHWAY | Regulation of p38-alpha and p38-beta |
0.0 | 0.6 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
0.0 | 0.6 | ST GAQ PATHWAY | G alpha q Pathway |
0.0 | 0.6 | PID WNT NONCANONICAL PATHWAY | Noncanonical Wnt signaling pathway |
0.0 | 0.5 | ST STAT3 PATHWAY | STAT3 Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.9 | REACTOME CHOLESTEROL BIOSYNTHESIS | Genes involved in Cholesterol biosynthesis |
0.1 | 1.3 | REACTOME TETRAHYDROBIOPTERIN BH4 SYNTHESIS RECYCLING SALVAGE AND REGULATION | Genes involved in Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation |
0.0 | 1.1 | REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION | Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression |
0.0 | 0.9 | REACTOME CITRIC ACID CYCLE TCA CYCLE | Genes involved in Citric acid cycle (TCA cycle) |
0.0 | 0.8 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
0.0 | 0.7 | REACTOME RETROGRADE NEUROTROPHIN SIGNALLING | Genes involved in Retrograde neurotrophin signalling |
0.0 | 0.7 | REACTOME SIGNALLING TO P38 VIA RIT AND RIN | Genes involved in Signalling to p38 via RIT and RIN |
0.0 | 0.7 | REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT | Genes involved in ABC-family proteins mediated transport |
0.0 | 0.5 | REACTOME ACTIVATION OF RAC | Genes involved in Activation of Rac |
0.0 | 0.5 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |