avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Klf15 | mm10_v2_chr6_+_90462562_90462587 | 0.65 | 1.9e-05 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_-_148045891 Show fit | 5.11 |
ENSMUST00000109964.1
|
forkhead box A2 |
|
chr5_+_130448801 Show fit | 3.91 |
ENSMUST00000111288.2
|
calneuron 1 |
|
chr18_-_38211957 Show fit | 3.45 |
ENSMUST00000159405.1
ENSMUST00000160721.1 |
protocadherin 1 |
|
chr11_+_98348404 Show fit | 3.23 |
ENSMUST00000078694.6
|
protein phosphatase 1, regulatory (inhibitor) subunit 1B |
|
chr7_-_99626936 Show fit | 3.08 |
ENSMUST00000178124.1
|
predicted gene 4980 |
|
chr4_+_97777780 Show fit | 2.98 |
ENSMUST00000107062.2
ENSMUST00000052018.5 ENSMUST00000107057.1 |
nuclear factor I/A |
|
chr2_-_25501717 Show fit | 2.91 |
ENSMUST00000015227.3
|
complement component 8, gamma polypeptide |
|
chr8_-_41133697 Show fit | 2.89 |
ENSMUST00000155055.1
ENSMUST00000059115.6 ENSMUST00000145860.1 |
mitochondrial tumor suppressor 1 |
|
chr2_-_5714490 Show fit | 2.73 |
ENSMUST00000044009.7
|
calcium/calmodulin-dependent protein kinase ID |
|
chr10_-_81430966 Show fit | 2.58 |
ENSMUST00000117966.1
|
nuclear factor I/C |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.4 | GO:0010758 | regulation of macrophage chemotaxis(GO:0010758) |
1.7 | 5.1 | GO:0045014 | carbon catabolite repression of transcription(GO:0045013) negative regulation of transcription by glucose(GO:0045014) |
0.6 | 5.1 | GO:0006004 | fucose metabolic process(GO:0006004) |
1.4 | 4.3 | GO:0048627 | myoblast development(GO:0048627) |
0.6 | 4.0 | GO:0016480 | negative regulation of transcription from RNA polymerase III promoter(GO:0016480) |
0.2 | 4.0 | GO:0016339 | calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0016339) |
0.2 | 3.8 | GO:0072189 | ureter development(GO:0072189) |
0.8 | 3.3 | GO:0090472 | dibasic protein processing(GO:0090472) |
0.8 | 3.2 | GO:0007621 | negative regulation of female receptivity(GO:0007621) |
0.1 | 3.2 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.1 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.1 | 3.9 | GO:0032588 | trans-Golgi network membrane(GO:0032588) |
0.2 | 3.7 | GO:0012510 | trans-Golgi network transport vesicle membrane(GO:0012510) |
0.3 | 2.9 | GO:0005579 | membrane attack complex(GO:0005579) |
0.0 | 2.8 | GO:0005793 | endoplasmic reticulum-Golgi intermediate compartment(GO:0005793) |
0.0 | 2.7 | GO:0030175 | filopodium(GO:0030175) |
0.0 | 2.4 | GO:0045335 | phagocytic vesicle(GO:0045335) |
0.0 | 2.1 | GO:0001650 | fibrillar center(GO:0001650) |
0.0 | 1.8 | GO:0032587 | ruffle membrane(GO:0032587) |
0.2 | 1.7 | GO:0070695 | FHF complex(GO:0070695) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 5.1 | GO:0042806 | fucose binding(GO:0042806) |
0.2 | 3.3 | GO:0048406 | nerve growth factor binding(GO:0048406) |
1.1 | 3.2 | GO:0031752 | D4 dopamine receptor binding(GO:0031751) D5 dopamine receptor binding(GO:0031752) |
0.1 | 3.2 | GO:0008392 | arachidonic acid epoxygenase activity(GO:0008392) |
0.2 | 2.9 | GO:0019841 | retinol binding(GO:0019841) |
0.3 | 2.8 | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity(GO:0004571) |
0.0 | 2.8 | GO:0001205 | transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001205) |
0.0 | 2.6 | GO:0004712 | protein serine/threonine/tyrosine kinase activity(GO:0004712) |
0.0 | 2.6 | GO:0008083 | growth factor activity(GO:0008083) |
0.2 | 2.5 | GO:0022841 | potassium ion leak channel activity(GO:0022841) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 13.6 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.2 | 5.0 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.0 | 4.9 | PID NOTCH PATHWAY | Notch signaling pathway |
0.1 | 4.1 | PID LKB1 PATHWAY | LKB1 signaling events |
0.1 | 2.9 | PID NECTIN PATHWAY | Nectin adhesion pathway |
0.0 | 2.8 | PID REG GR PATHWAY | Glucocorticoid receptor regulatory network |
0.0 | 2.4 | PID BMP PATHWAY | BMP receptor signaling |
0.0 | 2.4 | PID MTOR 4PATHWAY | mTOR signaling pathway |
0.0 | 1.9 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.0 | 1.5 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.9 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |
0.2 | 4.3 | REACTOME HS GAG DEGRADATION | Genes involved in HS-GAG degradation |
0.2 | 3.3 | REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS | Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins |
0.1 | 3.2 | REACTOME DARPP 32 EVENTS | Genes involved in DARPP-32 events |
0.1 | 2.9 | REACTOME COMPLEMENT CASCADE | Genes involved in Complement cascade |
0.2 | 2.5 | REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS | Genes involved in Tandem pore domain potassium channels |
0.0 | 2.5 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.1 | 2.4 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 1.7 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.1 | 1.5 | REACTOME DOWNREGULATION OF TGF BETA RECEPTOR SIGNALING | Genes involved in Downregulation of TGF-beta receptor signaling |